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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE5847_top500tf

DescriptionTumor and stroma from breast by LCM
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE5847 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

ESR1
TFAP2B
GATA3
PEG3
ELF5
ATF3
FOSB
TFAP2A
FOS
SOX11
TWIST1
NFIB
ZNF238
NR2F1
XBP1
MEOX1
KLF4
SPDEF
CDKN2A
NR4A2
FOXA1
ZIC1
TCF4
NKX3-1
TFEC
EGR3
AEBP1
STAT1
MEOX2
JUN
TBX3
SOX9
HOXC10
MYC
EGR1
ZEB1
ESRRG
SNAI2
PBX1
ERG
MECOM
TRPS1
ZEB2
RCAN1
LEF1
IRX5
SLC26A3
TFAP2C
ZFPM2
FOXM1
CEBPD
MEIS2
NFIL3
HOPX
MAFF
EPAS1
HOXA9
ELF3
NR4A3
TRIM29
GAS7
EGR2
RUNX1T1
WT1
MEF2C
IRF7
KLF2
KLF9
GATA2
WNT5A
LASS6
AR
NR2F2
SOX10
TRIM22
ARNT2
GATA6
EHF
ZNF165
ETS2
SOX4
BHLHE41
TP63
CREBL2
LMO4
HEY1
FOXC1
NR1H3
CEBPB
HES1
FOXN3
MAF
MAFB
FLI1
CITED1
ZNF91
KLF6
HCLS1
IRF8
PLSCR1
ASCL1
BTG2
KLF5
PPARG
EN1
RORA
MEIS1
TFDP1
E2F3
ELK3
TCFL5
PBX3
MSRB2
PTTG1
ZNF281
RUNX1
TCF7L1
CSDA
IRF6
TSC22D3
ENO1
TCF25
SATB1
GRHL2
NR3C1
FOXO1
KLF10
SCML1
MTA1
MSX1
AHR
BHLHE40
KDM5B
FOSL2
HIRA
ZNF83
HOXB6
PURA
NR4A1
FOXG1
HOXA5
PCGF2
ETV1
ADNP
CITED2
TFAM
TCEAL1
HIF3A
JUNB
HMGB2
CREBZF
LASS2
TCF7L2
YBX1
MITF
ZFP36L2
CIR1
RBCK1
BCL6
TSC22D2
ZSCAN18
NOLC1
NR2F6
RUNX3
ZNF217
HMGA1
TEAD4
BACH1
HOXB2
KLF11
SPIB
SREBF1
PITX1
HIF1A
ZNF232
DLX2
TRIM28
RB1
ZNF45
IRF1
CNOT8
MEIS3P1
FOXF2
CTBP1
TGIF2
ARNTL2
RCOR1
ELF4
ZNF323
TFDP2
TGIF1
PGR
SPEN
HNRNPAB
NOTCH1
NFIX
ZBTB38
SLC30A9
HOXD4
PLAG1
ZSCAN16
TCF3
SIX2
ZNF24
TSC22D1
E2F5
AFF1
SMAD1
ZNF167
FOXO3
MYCL1
SOX17
NFAT5
RFX5
FOXK2
NR2C1
VDR
MZF1
NFYA
RERE
ZNF3
SMAD3
ATF1
ZFP36L1
ZNF131
CBFB
NFYB
RFXANK
NFYC
RBPJ
ZKSCAN1
SRF
GTF2H3
GTF2H4
LHX6
FBXW7
BCL11B
HMGB1
TAL1
HMG20B
MYNN
CREB3L2
TARDBP
TAF5
CEBPA
MEF2A
HOXA10
LZTS1
E4F1
MYCN
KDM5A
CREB3L1
ZFHX4
TCF7
HEY2
BUD31
KLF7
HDAC2
ATF5
HOXC8
CREM
BCL3
MMP14
STAT4
FUBP1
MSX2
IRF9
IRF2
BATF
NFATC1
TAF7
CNOT7
HOXC4
CTNNB1
MYBL2
DRAP1
TP53
TCF12
BACH2
FEV
SMAD4
HLF
NR1D2
NFATC4
ZNF277
TBX10
BRD8
CSRNP2
NR5A2
EDF1
JUND
SMAD2
ZNF133
CBFA2T3
HNRNPK
STRN3
ZNF75D
SP3
SP140
RXRA
MLL
HOXA1
ZNF148
BTAF1
SOX13
TFCP2
ETV5
E2F8
TAF4
HOXB7
STAT5B
ELF1
HDAC1
TFCP2L1
ATF2
HHEX
SIM2
ZNF135
GABPB1
NFE2L2
HOXD3
FOXD1
HSF1
PBX2
ZNF117
KLF12
UBN1
DDIT3
CUX1
HNF1B
NFE2L1
ELK1
SCAND1
MNX1
ADNP2
SALL2
STAT5A
SATB2
ZHX2
ZNF274
NPAT
RARA
SUPT6H
VAV1
UBP1
IRX4
PRDM2
SUPT4H1
STAT3
CTCF
SIX3
MSL3
HMBOX1
NEUROD2
GLI3
HOXB5
NFATC3
CNBP
SOX21
PHF1
E2F6
POU6F1
SIM1
AATF
STAT6
ELF2
ZNF444
TFEB
HMG20A
TCF20
CREB1
NFIC
TBX2
CREBBP
SLC2A4RG
ZNF193
NR3C2
PRRX2
PRDM1
MAX
IRF3
IRF4
GCFC1
GTF2IRD1
SOX12
YEATS4
ZNF236
TAF10
ZNF174
TBP
IRF5
TULP4
ZNF202
NCOR1
ZNF268
NR0B1
AHCTF1
ATF6
TBX5
CREB5
BATF3
SMAD6
FOXA2
TLX3
ZXDC
TCF15
NFKB1
LHX3
HOXC11
NPAS2
TFE3
NFE2L3
FOXO4
GATAD1
MLLT10
C2orf3
KLF3
THRA
MYT1
YY1
ZNF93
SREBF2
EGR4
ZHX3
SNAPC5
ZNF394
USF2
PLAGL2
PKNOX2
ZBTB17
ZNF207
TADA3
TBX19
FOXF1
FOXJ3
ZNF263
SCML2
PPARD
HSF2
ATF4
SOX15
ZNF189
RARB
ECSIT
PKNOX1
ZGPAT
ATF6B
SIX1
PHTF1
ARNT
DMTF1
ZBTB48
MNT
NANOG
MAFG
E2F4
PAX6
PRRX1
CBFA2T2
ALX1
NKX3-2
HOXD9
RELB
HOXD10
ARNTL
C11orf9
REST
ZNF215
RNF4
LZTR1
IKZF1
CUX2
GATAD2A
ARID4A
MGA
NFX1
TAF6
SP4
E2F1
GLI2
HR
ZNF434
POU2F3
ZNF500
NR1I2
MLX
ZNF132
NFKB2
MBD1
MLXIPL
TSHZ2
HOXD1
ETV7
PA2G4
FOXJ2
CLOCK
ZBTB25
ZNF33B
ZSCAN12
TEAD1