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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE25055_top500tf

DescriptionDiscovery cohort for genomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE25055 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

TFAP2B
ELF5
FOS
GATA3
ZIC1
ESR1
PBX1
PGR
SOX11
SPDEF
PITX1
SLC26A3
MEOX2
ZNF165
EN1
NFIB
NFE2
ASCL1
HOXB6
SOX10
NR2F1
TBX3
POU1F1
ETV1
TP53
TRIM29
PLAG1
JUND
TAF13
NR4A2
TCF4
NR0B1
SATB2
HOXB2
MSX2
FOXA1
DLX2
NPAS2
PAX3
ARNT2
ZEB1
ZNF135
RUNX1T1
IRX4
WT1
TCF7L2
MEF2C
MAX
MXD1
CITED1
SMAD6
SNAPC5
HOXA9
POU2F3
SIX1
HOXA10
HLF
FOXD1
ZNF80
MYCN
TBX1
ZNF157
SUPT6H
GSC2
NFAT5
PPARG
ESRRG
NFYA
SOX30
MECOM
E2F5
PITX2
EHF
NR5A2
ZNF238
MMP14
FOXM1
ZNF167
PTH
MYBL2
WNT5A
FOXE1
TAF12
ZNF287
POU4F1
MNX1
SIX3
SCML1
PEG3
MYF5
HEY2
KLF6
LEF1
IRF4
BHLHE41
IKZF1
NR2F2
ZFP36L2
CUX2
MLLT10
NFX1
ZNF444
ZSCAN18
XBP1
ST18
SIM1
PKNOX1
CREM
SALL1
KLF9
ZBTB48
AEBP1
AR
KDM5B
TAL1
TLX3
MZF1
POU4F3
PRDM2
JUN
GBX2
FOSL1
NPAS1
LHX2
HEY1
TWIST1
MAF
CREB5
TADA3
ZFP37
RARB
ZNF41
TCF21
PDX1
ZFHX3
MYC
TCF3
ZNF174
E2F8
BLZF1
GATA6
RB1
GATA4
ZNF155
ZNF236
FOSB
TFAP2C
SPI1
NFKB2
TBX19
RFXAP
MGA
ZXDC
RXRA
HOXB9
NFIX
CREB3L1
HOXA7
GABPB1
ZNF81
PAX6
TBX6
ISL1
ARNTL2
NEUROD1
EGR4
ESR2
SCAND2
FOSL2
MSC
NKX2-5
RUNX3
ZIC3
ZFP36L1
DMRT1
HOXD3
IKZF3
RERE
TSC22D2
STAT1
ETV2
C11orf9
ZNF446
BRD8
FOXG1
ASCL2
ZFPM2
CITED2
KLF12
ELK4
FOXC1
CDKN2A
POU3F2
TFEB
CREBZF
LMO4
SP1
POU3F3
GABPA
AHR
MAFK
ZNF639
RARA
ELF4
SRY
TEF
MYT1
SCRT1
SOX2
TCF12
REXO4
FOXC2
ARNTL
REST
HOXC13
SNAI2
NFATC1
ELK1
TSC22D3
ERG
ZGPAT
NFATC4
RUNX1
GAS7
HINFP
HOXD1
VTN
SMAD3
PPARD
ZEB2
STRN3
POU6F1
C2orf3
EN2
NR2F6
NR2C1
NPAT
NR6A1
FOXL2
TLX2
TAF1B
MYT1L
OVOL1
TBX2
HOXA11
ZNF154
HNF4G
KLF4
TP63
THRA
IRX5
ZNF643
ARNT
RARG
BARX1
PPARA
NR3C2
ZNF45
SOX9
TBX5
HESX1
FOXI1
HOXB7
GATA2
ETV5
SIM2
BHLHE40
FOXH1
VDR
PAX8
FLI1
PHF1
DBP
FOXO4
LZTS1
TBX10
FOXD2
RCAN1
FOXN3
HOXC10
TCF15
CSDA
HOXA2
NFYC
MEOX1
HNF1B
ALX3
NKX2-1
ZNF3
LHX6
CSRNP3
E2F4
LHX1
HMGA1
MLL
GCM1
KLF15
NFATC3
ETV4
KLF5
ZNF134
PPBPL2
ONECUT1
NR4A1
TCF7
HNF1A
HOXC8
EGR2
FOXJ1
CBFA2T2
ATF6
NR1H4
PRRX2
TADA2A
NEUROG1
DLX6
POU2F2
YY1
EPAS1
NFYB
MEF2A
ERF
RXRB
BATF3
E2F6
TRIM25
HNF4A
TSHZ2
ECSIT
PHOX2B
MLXIPL
SOX15
TFAP2A
SATB1
HOPX
ZHX3
MYF6
FOXA2
BNC1
ZNF323
MAFF
HMG20B
HSF4
ATF6B
TRPS1
NR3C1
SP140
NKX3-2
ELF1
PAX4
HOXB3
NR5A1
HSF2
TEAD4
NFE2L1
FOXD3
TFDP2
SNAPC4
RUNX2
SPIB
HOXD13
BCL6
HCLS1
NRL
ATF5
FOXP3
E2F2
GLI2
ENO1
HOXA5
HOXA1
PLSCR1
MEF2D
E2F1
SOX4
SMAD1
NANOG
NR2E1
NR1I2
PKNOX2
STAT2
BTG2
ZNF202
ZNF117
OLIG2
POU3F4
PAX7
HIF3A
PRDM1
E2F3
SRF
SOX13
ATOH1
ARID3A
CEBPE
BCL11B
HMGB2
HOXB1
FOXB1
PHOX2A
POU5F1B
MSRB2
CBFB
PAX5
ETS1
USF2
HOXD11
SOX17
TBR1
LASS6
FOXO1
CREBBP
TFEC
CNOT8
ESRRB
SOX18
HOXA3
ZNF83
PROX1
HSF1
NR4A3
EGR1
MYCL1
POU4F2
POU6F2
ALS2CR8
POU3F1
STAT3
HOXD9
MBD1
MEIS2
ADNP2
FOXO3
PBX2
TFDP3
HOXD4
SREBF1
STAT6
SOX21
MTA2
CTBP1
MSX1
ELK3
HMGA2
ZNF175
ZNF91
NR1I3
NKX2-8
ZNF140
PHTF1
ZSCAN12
ZNF75D
TFE3
HR
EGR3
ZKSCAN1
IRF8
HIC1
NKX3-1
HIRA
ONECUT2
ESRRA
HOXC5
IRF5
GTF2I
TP73
HES1
T
HOXD12
YEATS4
ZHX2
KLF2
VENTX
GATA1
TRIM22
HIF1A
HOXB8
MEIS3P1
HOXA4
RFX3
FOXF1
EMX1
MAFB
TFAM
SOX5
YBX1
SP4
CUX1
TAF5
ATF7
HDAC2
SIX2
NR2C2
CEBPB
NR2E3
AFF1
TCF7L1
RBPJL
ATF3
HAND1