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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE23988_top500tf

DescriptionExpression data from breast cancer FNA biopsies from patients (US samples)
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE23988 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

TFAP2B
SOX11
ELF5
ZIC1
TBX3
SPDEF
ESR1
PGR
PITX1
SOX10
SLC26A3
NFIB
WT1
POU1F1
PBX1
SIX3
SCML1
GATA3
NR2F1
MAX
NPAS2
SATB2
FOS
HOXB2
ZNF165
NR2F2
ASCL1
TCF4
EHF
IRX4
MYCN
TP53
MSX2
ETV1
EN1
PITX2
ARNT2
NFE2
TCF7L2
PAX3
HOXB6
TAF13
ZNF135
PLAG1
POU2F3
FOXA1
DLX2
TFAP2C
TBX1
ZEB1
JUND
NR4A2
GATA6
ESRRG
MLLT10
NFAT5
MEOX2
FOXD1
NR3C1
SNAPC5
ZNF287
ZFP36L2
MECOM
TADA3
GSC2
PPARG
ZNF167
HOXB9
SIM1
NFYA
KLF4
LEF1
HOXA10
HOXA9
IKZF1
WNT5A
MSC
STAT1
MXD1
RUNX1T1
ZNF444
HLF
SOX2
FOXC1
BHLHE40
FOXN3
TRIM29
SMAD6
MMP14
CREB3L1
TBX19
SIX1
FOXC2
PKNOX1
POU4F3
NR2F6
ZNF41
HEY2
SOX30
KLF9
MYF5
TCF12
SUPT6H
NFATC4
XBP1
KLF6
ETV5
ZGPAT
TCF21
ZXDC
STRN3
ZNF80
JUN
IRF4
ZNF238
SP1
RXRA
CREB5
AHR
MNX1
KDM5B
AEBP1
ETV2
GAS7
FOXE1
ZNF75D
PTH
ZNF157
TFEB
ECSIT
PAX6
ZFP36L1
MYBL2
TAF12
TRIM25
E2F5
ZFP37
NR0B1
MZF1
LMO4
AR
CITED2
NR3C2
CREM
ZNF91
NFIX
RUNX3
CREBZF
CTBP1
VTN
HEY1
TCF3
SATB1
RUNX1
POU3F2
IRX5
TCF15
HOXC13
TBX6
NR5A2
HOXA7
ZNF236
CUX2
SPI1
FOXH1
LHX2
THRA
MAF
SCAND2
ST18
BHLHE41
RARB
TAL1
ERF
BRD8
ZSCAN18
MYC
SNAI2
ARNT
NR6A1
FOSL1
ZNF639
GATA2
EPAS1
NFX1
PDX1
TAF1B
CDKN2A
FOXO4
ZNF155
HOXD3
SRY
BLZF1
MEF2C
NFATC1
ARNTL
EGR2
ZNF446
MSX1
IRF7
MGA
MEF2A
TBX5
PPARD
ATF6
NKX2-5
ZNF45
SOX4
POU5F1B
PEG3
ELK1
ARNTL2
HINFP
TWIST1
TFE3
FOSL2
ZNF643
HOXD1
REST
ELK4
TSC22D3
TSC22D2
C11orf9
ZBTB48
SREBF1
SIM2
ERG
GABPA
NPAS1
VDR
CSDA
SNAPC4
HOXC10
SOX9
HOXB7
TLX3
REXO4
PPARA
RCAN1
PLSCR1
CBFA2T2
NEUROG1
ISL1
ZNF174
RARA
GTF2I
FOXI1
ESR2
TFAM
TBX2
HSF1
MLXIPL
MYT1L
ATOH1
EN2
ASCL2
NR4A1
NFYB
SCRT1
RERE
HNF1B
MYT1
NEUROD1
ETV4
TEF
ZEB2
GABPB1
HMG20B
FOXA2
RARG
OVOL1
NFATC3
POU6F1
ADNP2
LZTS1
ZNF3
RB1
TP63
HOXC8
RFXAP
DMRT1
FOXM1
TFCP2
MLL
BNC1
PRDM2
BATF
HNF4G
ZNF134
HESX1
ZNF81
STAT2
ZFHX3
SMAD3
PRDM1
ZNF117
PHF1
NFIC
ONECUT1
ZHX3
HMGA1
FOXD3
PPBPL2
EGR4
GCM1
MAFK
NFYC
ZHX2
ZNF154
BARX1
FOXG1
ELF1
HOPX
SMAD1
KLF12
DLX6
SOX18
MEF2D
GBX2
MBD1
ZIC3
ELF4
ALX3
MAFF
HOXA3
PAX8
POU3F3
HDAC2
E2F6
NKX2-1
HOXA11
HOXD11
USF2
LASS6
HNF1A
MEOX1
ETS2
RORA
FOXP3
HOXB1
TFEC
HOXB3
POU3F4
CITED1
ATF5
RUNX2
KLF5
SALL1
ZNF187
TEAD4
CUX1
NKX3-1
BUD31
CBFB
ZNF175
C2orf3
CSRNP3
TLX2
POU4F1
MAFB
NFKB2
NFE2L1
SOX5
NR2C1
HIF3A
BATF3
FOXO1
SOX13
SLC2A4RG
GATA4
NKX2-8
ENO1
PROX1
HIRA
SMAD5
FOXJ1
RFXANK
NKX3-2
TFAP2A
PHOX2A
FLI1
DBP
RFX5
ATF2
E2F2
E2F3
PRRX2
ARID3A
ELK3
ZNF394
FOXD2
PAX4
BCL3
MEIS2
BCL11B
MTA2
ALS2CR8
HNF4A
TRPS1
GTF2H3
E4F1
MSRB2
E2F4
SOX17
FOXL2
ZNF132
POU3F1
CNOT8
HCLS1
HMGB2
YY1
NR5A1
ONECUT2
RNF4
HOXA2
TFDP2
ATF6B
GLI2
HSF2
YBX1
HOXD13
NOTCH1
STAT3
RXRB
MEIS3P1
FOXO3
ZNF140
NR1I3
FUBP1
IRF9
ETS1
HOXA5
EDF1
HIF1A
PAX5
HOXD9
LHX6
CREBBP
CEBPE
MYF6
TRIM28
ZNF93
PKNOX2
E2F1
ELF2
HAND2
EGR1
NR1H4
MLX
TBX10
TLX1
RBPJL
TRIM22
HES1
ZNF217
EMX1
CEBPD
CEBPB
FBXW7
KLF11
NFIL3
BCL6
CREB3
NR1I2
ZNF219
NRL
SPIB
VAX2
MYOD1
ZFPM2
ESRRB
RORB
NPAT
TCF7
LASS2
ZNF24
FOXE3
POU6F2
LHX5
PBX2
STAT6
TSHZ2
HOXA4
ATF1
POU2F2
IRF8
SP140
HHEX
PHTF1
MYCL1
OLIG2
PBX3
CBL
TFDP1
E2F8
IKZF3
FOSB
ZKSCAN1
TFCP2L1
LHX1