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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE12276_top500tf

DescriptionExpression data from primary breast tumors
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE12276 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

ANKRD30A
TFAP2B
ZIC1
ELF5
ASCL1
FOXA1
SLC26A3
ESR1
PGR
SOX10
SOX8
DLX1
DLX2
ZIC2
SOX11
PAX6
EN1
SOX2
FOXC1
ONECUT2
PEG3
MKX
LHX8
FOXD1
WT1
MSX2
ARX
GATA3
BNC1
TBX1
TRIM29
SPDEF
SOX6
TFCP2L1
FOSB
SIM1
HOXB13
NR2F6
SIX1
PITX1
SCAND3
CITED1
SIX3
IRX2
PAX7
MYT1
SPIB
RARA
SIM2
NFIB
DLX6
FOXO3
ZNF238
TFE3
ARNTL2
HOXA13
FOXG1
IRX4
LHX2
ASCL2
IRX1
EHF
ESRRG
ISL2
HEY2
SPIC
NPAS2
HOXA9
GATA5
MGA
RORA
FOXI1
GRHL3
THRA
SALL1
TEAD2
LHX9
HES6
SMAD3
ZNF215
PROX1
NCOR1
POU4F1
C12orf28
POU2F3
HIC1
HNF4G
GATA4
MNX1
ZSCAN4
SOX5
NR2F1
IRF6
MESP1
HMGA2
ATF2
NANOG
RXRB
TBX22
MYT1L
TSHZ2
ST18
MAF
RUNX1
CSRNP3
ZFP42
HIF3A
DMRT1
MEOX2
FOXL1
POU1F1
CDKN2A
HOXD3
IRF4
CUX2
HSF5
BCL11B
USF1
ESR2
RORB
NKX2-3
ENO1
HOXA1
OVOL1
PAX3
SIX4
CREBZF
NR4A3
POU3F2
HOXD4
OTX2
ETV4
FOXE1
ISX
DMBX1
NEUROD1
HOXA11
ZIC3
HOXC13
TBX10
HOXC10
NR5A2
SATB2
POU4F2
EGR4
SMAD4
IKZF3
HOXB6
KCNH8
NFATC1
SCAND2
ZSCAN23
TBX2
NKX2-5
DLX3
ZNF483
TBX3
MITF
ZNF396
NFATC4
STAT5B
PTH
FOXJ1
FOXP2
SOX30
TEF
TP63
RUNX1T1
CREB3L1
HOXB8
AR
BARX1
ZNF175
TLX3
GLI2
L3MBTL4
MLL
MECOM
ZNF157
MXD1
MYNN
CREM
ZEB1
SOX15
FOXA3
TLX1
ZFP36L2
FLI1
SUPT6H
ISL1
HOXD13
HLF
NFE2
MEOX1
ESX1
PKNOX2
HR
TBX5
VTN
ZNF81
NR1H4
TCF3
SOX1
ZNF80
GSC2
MEIS3
BCL3
GSX2
NR2E1
LMX1B
ZNF92
HOXB2
EN2
PLSCR1
NFYA
MYF6
ETV7
GLI3
GCM1
SIX2
ZNF135
HOXD11
NPAT
NR2E3
RUNX2
LMX1A
NR1I3
RORC
BLZF1
FOSL1
SP140
MYCN
POU2F1
LMO4
PRDM2
TP73
ESRRB
HOXD1
NR6A1
PAX8
MTA2
FOXD3
MYF5
NPAS1
BRD8
FOXR2
HNF1A
FOS
RCAN1
C2orf3
IKZF1
CSDA
ARNT
MMP14
NFIX
DMRT2
NEUROD2
KLF5
ELK1
ONECUT1
MESP2
ALX1
CREB3L3
NKX6-2
ETV6
BHLHE40
NKX2-1
STAT1
ETV1
ZFP36L1
HOPX
NRL
ARNT2
SREBF1
AHCTF1
AFF4
ZNF93
VSX1
HNRNPAB
FOXO1
ZNF85
SMAD2
REST
EMX1
JUND
ZNF71
ZSCAN1
GSC
NKX3-1
KLF12
ZFHX4
SMAD6
TFDP3
GATAD1
PDX1
NFIA
FOXL2
C11orf9
HIRA
ZNF397
TCF21
ZNF132
BHLHE41
HOXA2
ZNF154
FOXD2
ZEB2
GLIS3
RERE
MYC
WNT5A
POU5F2
OLIG2
HOXA7
HMG20B
RARB
PHOX2B
RFXAP
KDM5B
TBX20
EPAS1
HOXC11
SLC2A4RG
RXRG
TAF13
PPARA
LZTS1
HOXA10
CTBP1
GBX2
TCF7L1
NR0B1
STRN3
ZNF131
FOXP3
ZNF496
HESX1
MLLT10
LASS5
NFKB2
SNAI3
FOXQ1
SIN3A
PRRX2
HOXB3
TCF20
ZSCAN2
GTF2I
NOBOX
SP1
GSX1
RFX3
ZNF287
ALS2CR8
ZNF41
PAX4
CBL
RARG
PKNOX1
HEY1
ETS2
DLX4
CREBBP
HES5
KLF9
SNAPC5
ZFHX3
MYCL1
ZNF90
KLF17
PCGF2
TBR1
SOX9
ZNF33B
PBX3
ZSCAN12
PPARD
NKX6-1
ELK4
NFATC2
HOXD10
SPI1
TADA2A
TSC22D3
LHX1
ZSCAN20
ATF6B
HSF1
NFE2L2
ZBTB17
TBX6
ATOH1
FOXH1
RUNX3
MYBL2
RELA
NR3C2
FUBP1
MIXL1
ZKSCAN3
ZNF169
NEUROG1
PPARG
POU3F1
ZNF117
TADA3
ZXDC
ZNF207
HCFC1
NR4A2
BATF2
LASS6
ATF3
TFAP2C
HAND2
HOXA5
FOSL2
POU6F2
TEAD1
ATF7
POU3F3
HOXB1
RCOR1
FOXM1
NR5A1
VDR
HOXC12
ALX4
ALX3
E2F2
XBP1
KLF4
CTNNB1
TFAP2D
HNF4A
TFAP4
FOXC2
ERF
TAL1
SP4
MEIS1
NKX2-8
PURA
LEF1
POU4F3
STAT2
HOXB7
FOXK1
TGIF2LY
FOXF1
CLOCK
PURB
SRY
TP53
SP3
HMX2
GATA6
TFAP2A
HOXA3
HOXA4
NFE2L3
POU2F2
AEBP1
FOXA2
TFDP1
PITX2
SEBOX
SIX6
GATA2
TSC22D2
FOXN4
TWIST2
MZF1
ZHX2
NFYC
ZIC5
EGR1
TRERF1
SCML1
ZNF446
NOTCH1
POU6F1
PAX5
MBD1
SCAND1
ZHX3
SOX21
YY1
MLX
ZFHX2
BTG2
HOXC5
PRRX1
MLXIPL
IRF5
ETV5
IRX5
ZSCAN18
CREB3L4
RAX2