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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene

PKNOX2

Entrez Gene ID63876 (See on NCBI)
DescriptionPBX/knotted 1 homeobox 2
Gene Synonyms PREP2
Node consisting of this GenePKNOX2

Networks including this gene


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GSE10063_top8000 - GSE10063 - SiGN-BN NNSREffects of tobacco smoke on gene expression and cellular pathways in a cellular model of oral leukoplakia
GSE10072_top8000 - GSE10072 - SiGN-BN NNSRGene expression signature of cigarette smoking and its role in lung adenocarcinoma development and survival
GSE10138_top8000 - GSE10138 - SiGN-BN NNSRA Genomic Approach to Improve Prognosis and Predict Therapeutic Response in Chronic Lymphocytic Leukemia (Duke_VA)
GSE10320_top8000 - GSE10320 - SiGN-BN NNSRPredicting Relapse in Favorable Histology Wilms Tumor Using Gene Expression
GSE10327_top8000 - GSE10327 - SiGN-BN NNSRmRNA expression data of 62 human medulloblastoma tumors
GSE10810_top8000 - GSE10810 - SiGN-BN NNSRGene expression signatures in breast cancer distinguish phenotype charact., histological subtypes, and tumor invasivness
GSE10843_top8000 - GSE10843 - SiGN-BN NNSRmRNA Cancer Cell Line Profiles
GSE10927_top8000 - GSE10927 - SiGN-BN NNSRHuman adrenocortical carcinomas (33), adenomas (22), and normal adrenal cortex (10), on Affymetrix HG_U133_plus_2 arrays
GSE10972_top8000 - GSE10972 - SiGN-BN NNSRColon cancer
GSE11121_top8000 - GSE11121 - SiGN-BN NNSRThe humoral immune system has a key prognostic impact in node-negative breast cancer
GSE11151_top8000 - GSE11151 - SiGN-BN NNSRGene expression data from different types of renal tumors and normal kidneys
GSE11482_top8000 - GSE11482 - SiGN-BN NNSRRhabdoid Tumor: Gene Expression Clues to Pathogenesis and Potential Therapeutic Targets
GSE11582_top8000 - GSE11582 - SiGN-BN NNSRGenetic Analysis of Human Traits In-Vitro: Drug Response and Gene Expression in Lymphoblastoid Cell Lines
GSE11869_top8000 - GSE11869 - SiGN-BN NNSRThe genomic response of a human uterine endometrial adenocarcinoma cell line to 17alpha-ethynyl estradiol.
GSE12093_top8000 - GSE12093 - SiGN-BN NNSRThe 76-gene Signature Defines High-Risk Patients that Benefit from Adjuvant Tamoxifen Therapy
GSE12195_top8000 - GSE12195 - SiGN-BN NNSRMutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma
GSE12276_top8000 - GSE12276 - SiGN-BN NNSRExpression data from primary breast tumors
GSE12428_top8000 - GSE12428 - SiGN-BN NNSRCurrent smoking-specific gene expression signature in bronchial epithelium is enhanced in squamous cell lung cancer
GSE12460_top8000 - GSE12460 - SiGN-BN NNSRExpression profiling of neuroblastic tumors
GSE12470_top8000 - GSE12470 - SiGN-BN NNSRGene expression profiles of serous ovarian cancer samples
GSE12622_top8000 - GSE12622 - SiGN-BN NNSRTumor-associated stroma derived from primary clinical breast cancer samples (II)
GSE12627_top8000 - GSE12627 - SiGN-BN NNSRNon-supervised hierarchical clustering of gene expression data
GSE12777_top8000 - GSE12777 - SiGN-BN NNSRGene expression profiling of 51 human breast cancer cell lines
GSE13009_top8000 - GSE13009 - SiGN-BN NNSRMCF7 EGF, HRG stimulation
GSE13168_top8000 - GSE13168 - SiGN-BN NNSREffects of glucocorticoids and Protein Kinase A on growth factor- and 1beta- regulated gene
GSE13507_top8000 - GSE13507 - SiGN-BN NNSRPredective Value of Prognosis-Related Gene Expression Study in Primary Bladder Cancer
GSE13598_top8000 - GSE13598 - SiGN-BN NNSRmRNA expression of 131 cancer cell lines
GSE13996_top8000 - GSE13996 - SiGN-BN NNSRMolecular profiling of classical Hodgkin’s lymphoma tissues
GSE14208_top8000 - GSE14208 - SiGN-BN NNSRClinical response of metastatic gastric cancer patients to cisplatin and fluorouracil (CF) combination chemotherapy
GSE14210_top8000 - GSE14210 - SiGN-BN NNSRExpression data from human endoscopic biopsy samples
GSE14764_top8000 - GSE14764 - SiGN-BN NNSRA Prognostic Gene Expression Index in Ovarian Cancer
GSE15459_top8000 - GSE15459 - SiGN-BN NNSRGastric Cancer Project '08 (Singapore Patient Cohort)
GSE15471_top8000 - GSE15471 - SiGN-BN NNSRWhole-Tissue Gene Expression Study of Pancreatic Ductal Adenocarcinoma
GSE15641_top8000 - GSE15641 - SiGN-BN NNSRGene signatures of progression and metastasis in renal cell cancer
GSE15765_top8000 - GSE15765 - SiGN-BN NNSRIdentification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma
GSE15966_top8000 - GSE15966 - SiGN-BN NNSRGene expression signature predictive of rapid response to imatinib mesylate in Gastrointestinal Stromal Tumor (GIST)
GSE16382_top8000 - GSE16382 - SiGN-BN NNSRExpression data from complex genetic sarcomas
GSE16455_top8000 - GSE16455 - SiGN-BN NNSRIndolent MCL identified by genomic and gene expression profiling
GSE16515_top8000 - GSE16515 - SiGN-BN NNSRExpression data from Mayo Clinic Pancreatic Tumor and Normal samples
GSE16581_top8000 - GSE16581 - SiGN-BN NNSRGenomic landscape of meningiomas: gene expression
GSE16987_top8000 - GSE16987 - SiGN-BN NNSRA new gene expression signature, the ClinicoMolecular Triad Classification, may improve prediction and prognostication of breast cancer at the time of diagnosis
GSE17372_top8000 - GSE17372 - SiGN-BN NNSRMolecular Classification of AIDS-Related Lymphomas [including third-party data]
GSE17705_top8000 - GSE17705 - SiGN-BN NNSREndocrine Sensitivity Index Validation Dataset
GSE17913_top8000 - GSE17913 - SiGN-BN NNSREffects of Cigarette Smoke on the Human Oral Mucosal Transcriptome
GSE17951_top8000 - GSE17951 - SiGN-BN NNSRGene expression analysis of prostate cancer samples using Affymetrix U133Plus2 array
GSE18684_top8000 - GSE18684 - SiGN-BN NNSRFine mapping of androgen regulated genes in LNCaP cells
GSE18842_top8000 - GSE18842 - SiGN-BN NNSRGene expression analysis of human lung cancer and control samples
GSE19027_top8000 - GSE19027 - SiGN-BN NNSRAntioxidant response gene expression in the bronchial airway epithelial cells of smokers at risk for lung cancer
GSE19069_top8000 - GSE19069 - SiGN-BN NNSRMolecular signatures in peripheral T-cell lymphoma (PTCL)
GSE19188_top8000 - GSE19188 - SiGN-BN NNSRExpression data for early stage NSCLC
GSE19494_top8000 - GSE19494 - SiGN-BN NNSRSubcutaneous adipose tissue (SAT) gene expression patterns between weight control and regaining weight subjects
GSE19615_top8000 - GSE19615 - SiGN-BN NNSRIntegrated genomic and function characterization of the 8q22 gain
GSE19804_top8000 - GSE19804 - SiGN-BN NNSRGenome-wide screening of transcriptional modulation in non-smoking female lung cancer in Taiwan
GSE20181_top8000 - GSE20181 - SiGN-BN NNSRLetrozole (Femara) early and late responses to treatment
GSE20189_top8000 - GSE20189 - SiGN-BN NNSRA gene expression signature from peripheral whole blood for stage I lung adenocarcinoma
GSE20194_top8000 - GSE20194 - SiGN-BN NNSRMAQC-II Project: human breast cancer (BR) data set
GSE20257_top8000 - GSE20257 - SiGN-BN NNSRSmoking-induced Disarray of the Apical Junctional Complex Gene Expression Architecture in the Human Airway Epithelium
GSE2034_top8000 - GSE2034 - SiGN-BN NNSRBreast cancer relapse free survival
GSE20685_top8000 - GSE20685 - SiGN-BN NNSRMicroarray-based molecular subtyping of breast cancer
GSE21050_top8000 - GSE21050 - SiGN-BN NNSRExpression data from Complex genetics sarcomas (cohort 1 and 2)
GSE21122_top8000 - GSE21122 - SiGN-BN NNSRWhole-transcript expression data for soft-tissue sarcoma tumors and control normal fat specimens
GSE2113_top8000 - GSE2113 - SiGN-BN NNSRPlasma cell dyscrasias expression profiles associated with distinct IGH translocations in multiple myeloma
GSE21452_top8000 - GSE21452 - SiGN-BN NNSRIntegrated genomic profiling in mantle cell lymphoma
GSE21501_top8000 - GSE21501 - SiGN-BN NNSRA six-gene signature predicts survival of patients with localized pancreatic ductal adenocarcinoma
GSE22093_top8000 - GSE22093 - SiGN-BN NNSRExpression data from breast cancer FNA biopsies from patients
GSE22138_top8000 - GSE22138 - SiGN-BN NNSRExpression Data from Uveal Melanoma primary tumors.
GSE22153_top8000 - GSE22153 - SiGN-BN NNSRGene Experssion Profiling-Based Identification of Molecular Subtypes in Stage IV Melanoma with Different Clinical Outcome (test set)
GSE22541_top8000 - GSE22541 - SiGN-BN NNSRExpression data from pulmonary metastases and primary tumors of clear-cell renal cell carcinoma (ccRCC) with different disease-free survivals
GSE22597_top8000 - GSE22597 - SiGN-BN NNSRExpression data from Fine Needle Aspiration (FNA) biopsies from breast cancer patients
GSE2294_top8000 - GSE2294 - SiGN-BN NNSRA Modular Analysis of Breast Cancer Reveals a Novel Low-Grade Molecular Signature in Estrogen Receptor-Positive Tumors
GSE23177_top8000 - GSE23177 - SiGN-BN NNSRPrediction of lymph node involvement in breast cancer from primary tumor tissue using gene expression profiling and miRNAs.
GSE23806_top8000 - GSE23806 - SiGN-BN NNSRExpression data of glioblastoma stem-like (GS) cell lines, conventional glioma cell lines and primary tumors
GSE23980_top8000 - GSE23980 - SiGN-BN NNSRExpression data from human soft tissue sarcomas with complex genomics
GSE23988_top8000 - GSE23988 - SiGN-BN NNSRExpression data from breast cancer FNA biopsies from patients (US samples)
GSE24124_top8000 - GSE24124 - SiGN-BN NNSRMajor gene partners of a favorable biomarker in ER(+) breast cancer
GSE24185_top8000 - GSE24185 - SiGN-BN NNSRGene transcription signature of obesity in breast cancer
GSE25055_top8000 - GSE25055 - SiGN-BN NNSRDiscovery cohort for genomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
GSE25065_top8000 - GSE25065 - SiGN-BN NNSRValidation cohort for genomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
GSE25066_top8000 - GSE25066 - SiGN-BN NNSRGenomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
GSE25136_top8000 - GSE25136 - SiGN-BN NNSROptimizing molecular signatures for prostate cancer recurrence
GSE2603_top8000 - GSE2603 - SiGN-BN NNSRSubpopulations of MDA-MB-231 and Primary Breast Cancers
GSE26712_top8000 - GSE26712 - SiGN-BN NNSRA Gene Signature Predicting for Survival in Suboptimally Debulked Patients with Ovarian Cancer
GSE27155_top8000 - GSE27155 - SiGN-BN NNSRHuman thyroid adenomas, carcinomas, and normals
GSE2841_top8000 - GSE2841 - SiGN-BN NNSRExpression Profiling of pheochromocytomas of various genetic origins
GSE28497_top8000 - GSE28497 - SiGN-BN NNSRNew markers for minimal residual disease detection in acute lymphoblastic leukemia
GSE28821_top8000 - GSE28821 - SiGN-BN NNSRLaser-capture microdissected invasive micropapillary carcinomas of the breast
GSE2912_top8000 - GSE2912 - SiGN-BN NNSRMolecular classification of multiple myeloma
GSE29288_top8000 - GSE29288 - SiGN-BN NNSRComparison between cell lines from 9 different cancer tissue (NCI-60) (Agilent WG platform)
GSE29598_top8000 - GSE29598 - SiGN-BN NNSRA Methodology for Utilization of Predictive Genomic Signatures in FFPE Samples
GSE29683_top8000 - GSE29683 - SiGN-BN NNSRCoexpression of Normally Incompatible Developmental Pathways in Retinoblastoma Genesis [human tumor/cell line data]
GSE30240_top8000 - GSE30240 - SiGN-BN NNSRExpression data from 5 human cell lines exposed to IR (5 Gy)
GSE30929_top8000 - GSE30929 - SiGN-BN NNSRWhole-transcript expression data for liposarcoma
GSE3141_top8000 - GSE3141 - SiGN-BN NNSRLung Cancer Dataset
GSE3149_top8000 - GSE3149 - SiGN-BN NNSROvarian Cancer Dataset
GSE3151_top8000 - GSE3151 - SiGN-BN NNSROncogene Signature Dataset
GSE31519_top8000 - GSE31519 - SiGN-BN NNSRA Clinically Relevant Gene Signature in Triple-Negative and Basal-Like Breast Cancer
GSE31547_top8000 - GSE31547 - SiGN-BN NNSRMSKCC-A Primary Lung Cancer Specimens
GSE3167_top8000 - GSE3167 - SiGN-BN NNSRClassification of carcinoma in situ lesions in human bladder cancer
GSE32269_top8000 - GSE32269 - SiGN-BN NNSRExpression data for primary localized prostate cancer versus castration-resistant bone metastatic prostate cancer
GSE32448_top8000 - GSE32448 - SiGN-BN NNSRCPDR tumor-benign 80 genechip dataset
GSE32474_top8000 - GSE32474 - SiGN-BN NNSRComparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix U133 Plus 2.0)
GSE3726_top8000 - GSE3726 - SiGN-BN NNSRPrognostic gene signatures can be measured with samples stored in RNAlater
GSE4115_top8000 - GSE4115 - SiGN-BN NNSRAirway Epithelial Gene Expression Diagnostic for the Evaluation of Smokers with Suspect Lung Cancer
GSE4183_top8000 - GSE4183 - SiGN-BN NNSRInflammation, adenoma and cancer: objective classification of colon biopsy specimens with gene expression signature
GSE4536_top8000 - GSE4536 - SiGN-BN NNSRTumor stem cells more closely mirror the phenotype and genotype of primary human tumors than do cancer cell lines
GSE4554_top8000 - GSE4554 - SiGN-BN NNSRGene expression signature of colorectal cancer with microsatellite instability.
GSE4573_top8000 - GSE4573 - SiGN-BN NNSRGene expression signatures for predicting prognosis of squamous cell lung carcinomas
GSE5107_top8000 - GSE5107 - SiGN-BN NNSRDistinct Transcription Profiles of Primary and Secondary Glioblastomas
GSE5327_top8000 - GSE5327 - SiGN-BN NNSRBreast cancer relapse free survival and lung metastasis free survival
GSE5364_top8000 - GSE5364 - SiGN-BN NNSRA Precisely Regulated Gene Expression Cassette Potently Modulates Metastasis and Survival in Multiple Solid Cancers
GSE5462_top8000 - GSE5462 - SiGN-BN NNSRLetrozole (Femara) early response to treatment
GSE5846_top8000 - GSE5846 - SiGN-BN NNSRNCI-60 Cancer Cell Line
GSE5851_top8000 - GSE5851 - SiGN-BN NNSRPhase II exploratory pharmacogenomics study of cetuximab monotherapy in patients with advanced metastatic CRC
GSE5900_top8000 - GSE5900 - SiGN-BN NNSRGene Expression of Bone Marrow Plasma Cells from Healthy Donors (N=22), MGUS (N=44), and Smoldering Myeloma (N=12)
GSE6008_top8000 - GSE6008 - SiGN-BN NNSRHuman ovarian tumors and normal ovaries
GSE6462_top8000 - GSE6462 - SiGN-BN NNSRMCF7 dose response
GSE6477_top8000 - GSE6477 - SiGN-BN NNSRExpression data from different stages of plasma cell neoplasm
GSE6481_top8000 - GSE6481 - SiGN-BN NNSRGene Expression Analysis of Soft Tissue Sarcomas: Characterization & Reclassification of Malignant Fibrous Histiocytoma
GSE6691_top8000 - GSE6691 - SiGN-BN NNSRGene expression profiling of B lymphocytes and plasma cells from WaldenstrÖm’s macroglobulinemia.
GSE6956_top8000 - GSE6956 - SiGN-BN NNSRTumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men
GSE7208_top8000 - GSE7208 - SiGN-BN NNSRExpression data from 59 human colon tumor tissue samples
GSE7390_top8000 - GSE7390 - SiGN-BN NNSRStrong Time Dependence of the 76-Gene Prognostic Signature
GSE7553_top8000 - GSE7553 - SiGN-BN NNSRGene Expression Patterns Involved in the Malignant Transformation and Progression of Metastatic Melanoma
GSE7670_top8000 - GSE7670 - SiGN-BN NNSRExpression data from Lung cancer
GSE7696_top8000 - GSE7696 - SiGN-BN NNSRGlioblastoma from a homogenous cohort of patients treated within clinical trial
GSE8139_top8000 - GSE8139 - SiGN-BN NNSRExpression data from MCF7/HER2-18 xenografts
GSE8141_top8000 - GSE8141 - SiGN-BN NNSRExpression data from MCF7 wt and MCF7/HER2-18 xenografts
GSE8218_top8000 - GSE8218 - SiGN-BN NNSRGene expression data from prostate cancer samples
GSE8332_top8000 - GSE8332 - SiGN-BN NNSRDeath receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL
GSE8401_top8000 - GSE8401 - SiGN-BN NNSRGene Signature for Aggression of Melanoma Metastases - Melanoma Metastasis
GSE8481_top8000 - GSE8481 - SiGN-BN NNSRVarious human cell types
GSE8671_top8000 - GSE8671 - SiGN-BN NNSRTranscriptome profile of human colorectal adenomas.
GSE8835_top8000 - GSE8835 - SiGN-BN NNSRChronic lymphocytic leukemia cells induce changes in gene expression of CD4 and CD8 T cells.
GSE9169_top8000 - GSE9169 - SiGN-BN NNSRGene expression during neuronal differentiation in two subtypes of SH-SY5Y
GSE9309_top8000 - GSE9309 - SiGN-BN NNSRRecovery of biological information under heterogeneous experimental conditions using subgroup standardization.
GSE9750_top8000 - GSE9750 - SiGN-BN NNSRIdentification of gene expression profiles in cervical cancer
GSE10063_top500tf - GSE10063 - SiGN-BN HC+BootstrapEffects of tobacco smoke on gene expression and cellular pathways in a cellular model of oral leukoplakia
GSE10072_top500tf - GSE10072 - SiGN-BN HC+BootstrapGene expression signature of cigarette smoking and its role in lung adenocarcinoma development and survival
GSE10138_top500tf - GSE10138 - SiGN-BN HC+BootstrapA Genomic Approach to Improve Prognosis and Predict Therapeutic Response in Chronic Lymphocytic Leukemia (Duke_VA)
GSE10320_top500tf - GSE10320 - SiGN-BN HC+BootstrapPredicting Relapse in Favorable Histology Wilms Tumor Using Gene Expression
GSE10327_top500tf - GSE10327 - SiGN-BN HC+BootstrapmRNA expression data of 62 human medulloblastoma tumors
GSE10810_top500tf - GSE10810 - SiGN-BN HC+BootstrapGene expression signatures in breast cancer distinguish phenotype charact., histological subtypes, and tumor invasivness
GSE10843_top500tf - GSE10843 - SiGN-BN HC+BootstrapmRNA Cancer Cell Line Profiles
GSE10927_top500tf - GSE10927 - SiGN-BN HC+BootstrapHuman adrenocortical carcinomas (33), adenomas (22), and normal adrenal cortex (10), on Affymetrix HG_U133_plus_2 arrays
GSE10972_top500tf - GSE10972 - SiGN-BN HC+BootstrapColon cancer
GSE11121_top500tf - GSE11121 - SiGN-BN HC+BootstrapThe humoral immune system has a key prognostic impact in node-negative breast cancer
GSE11151_top500tf - GSE11151 - SiGN-BN HC+BootstrapGene expression data from different types of renal tumors and normal kidneys
GSE11482_top500tf - GSE11482 - SiGN-BN HC+BootstrapRhabdoid Tumor: Gene Expression Clues to Pathogenesis and Potential Therapeutic Targets
GSE11582_top500tf - GSE11582 - SiGN-BN HC+BootstrapGenetic Analysis of Human Traits In-Vitro: Drug Response and Gene Expression in Lymphoblastoid Cell Lines
GSE11869_top500tf - GSE11869 - SiGN-BN HC+BootstrapThe genomic response of a human uterine endometrial adenocarcinoma cell line to 17alpha-ethynyl estradiol.
GSE12093_top500tf - GSE12093 - SiGN-BN HC+BootstrapThe 76-gene Signature Defines High-Risk Patients that Benefit from Adjuvant Tamoxifen Therapy
GSE12195_top500tf - GSE12195 - SiGN-BN HC+BootstrapMutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma
GSE12276_top500tf - GSE12276 - SiGN-BN HC+BootstrapExpression data from primary breast tumors
GSE12391_top500tf - GSE12391 - SiGN-BN HC+BootstrapMelanoma: comparison between common nevi, radial/vertical growth phase melanoma, metastases and dysplastic nevi
GSE12428_top500tf - GSE12428 - SiGN-BN HC+BootstrapCurrent smoking-specific gene expression signature in bronchial epithelium is enhanced in squamous cell lung cancer
GSE12460_top500tf - GSE12460 - SiGN-BN HC+BootstrapExpression profiling of neuroblastic tumors
GSE12470_top500tf - GSE12470 - SiGN-BN HC+BootstrapGene expression profiles of serous ovarian cancer samples
GSE12622_top500tf - GSE12622 - SiGN-BN HC+BootstrapTumor-associated stroma derived from primary clinical breast cancer samples (II)
GSE12627_top500tf - GSE12627 - SiGN-BN HC+BootstrapNon-supervised hierarchical clustering of gene expression data
GSE12667_top500tf - GSE12667 - SiGN-BN HC+BootstrapDiscovery of somatic mutations in lung adenocarcinomas
GSE12777_top500tf - GSE12777 - SiGN-BN HC+BootstrapGene expression profiling of 51 human breast cancer cell lines
GSE12790_top500tf - GSE12790 - SiGN-BN HC+BootstrapGene expression profiling of human breast cancers and cancer cell lines
GSE12945_top500tf - GSE12945 - SiGN-BN HC+BootstrapExpression data from colorectal cancers
GSE13009_top500tf - GSE13009 - SiGN-BN HC+BootstrapMCF7 EGF, HRG stimulation
GSE13067_top500tf - GSE13067 - SiGN-BN HC+BootstrapExpression data from primary colorectal cancers
GSE13168_top500tf - GSE13168 - SiGN-BN HC+BootstrapEffects of glucocorticoids and Protein Kinase A on growth factor- and 1beta- regulated gene
GSE13294_top500tf - GSE13294 - SiGN-BN HC+BootstrapExpression data from primary colorectal cancers
GSE13507_top500tf - GSE13507 - SiGN-BN HC+BootstrapPredective Value of Prognosis-Related Gene Expression Study in Primary Bladder Cancer
GSE13591_top500tf - GSE13591 - SiGN-BN HC+BootstrapIntegrated genomics approach to detect allelic imbalances in multiple myeloma
GSE13598_top500tf - GSE13598 - SiGN-BN HC+BootstrapmRNA expression of 131 cancer cell lines
GSE13911_top500tf - GSE13911 - SiGN-BN HC+BootstrapExpression data from primary gastric tumors (MSI and MSS) and adjacent normal samples
GSE13996_top500tf - GSE13996 - SiGN-BN HC+BootstrapMolecular profiling of classical Hodgkin’s lymphoma tissues
GSE14095_top500tf - GSE14095 - SiGN-BN HC+BootstrapGene expression signature and the prediction of liver metastasis in colorectal cancer by DNA microarray
GSE14206_top500tf - GSE14206 - SiGN-BN HC+BootstrapAnalysis of ETS gene expression patterns uncovers novel ETS mediated gene silencing pathways in prostate cancers
GSE14208_top500tf - GSE14208 - SiGN-BN HC+BootstrapClinical response of metastatic gastric cancer patients to cisplatin and fluorouracil (CF) combination chemotherapy
GSE14210_top500tf - GSE14210 - SiGN-BN HC+BootstrapExpression data from human endoscopic biopsy samples
GSE14333_top500tf - GSE14333 - SiGN-BN HC+BootstrapExpression data from 290 primary colorectal cancers
GSE14764_top500tf - GSE14764 - SiGN-BN HC+BootstrapA Prognostic Gene Expression Index in Ovarian Cancer
GSE14814_top500tf - GSE14814 - SiGN-BN HC+BootstrapPrognostic and Predictive Gene Signature for Adjuvant Chemotherapy in Resected Non-Small Cell Lung Cancer
GSE14925_top500tf - GSE14925 - SiGN-BN HC+BootstrapExpression data from Non small cell lung cancer cell lines
GSE15459_top500tf - GSE15459 - SiGN-BN HC+BootstrapGastric Cancer Project '08 (Singapore Patient Cohort)
GSE15471_top500tf - GSE15471 - SiGN-BN HC+BootstrapWhole-Tissue Gene Expression Study of Pancreatic Ductal Adenocarcinoma
GSE15641_top500tf - GSE15641 - SiGN-BN HC+BootstrapGene signatures of progression and metastasis in renal cell cancer
GSE15765_top500tf - GSE15765 - SiGN-BN HC+BootstrapIdentification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma
GSE15966_top500tf - GSE15966 - SiGN-BN HC+BootstrapGene expression signature predictive of rapid response to imatinib mesylate in Gastrointestinal Stromal Tumor (GIST)
GSE16120_top500tf - GSE16120 - SiGN-BN HC+BootstrapGene profiling, mutations and expression of epidermal growth factor receptor in androgen-dependent prostate cancer
GSE16237_top500tf - GSE16237 - SiGN-BN HC+BootstrapExpression data of human neuroblastoma tissue samples
GSE16382_top500tf - GSE16382 - SiGN-BN HC+BootstrapExpression data from complex genetic sarcomas
GSE16455_top500tf - GSE16455 - SiGN-BN HC+BootstrapIndolent MCL identified by genomic and gene expression profiling
GSE16515_top500tf - GSE16515 - SiGN-BN HC+BootstrapExpression data from Mayo Clinic Pancreatic Tumor and Normal samples
GSE16581_top500tf - GSE16581 - SiGN-BN HC+BootstrapGenomic landscape of meningiomas: gene expression
GSE16987_top500tf - GSE16987 - SiGN-BN HC+BootstrapA new gene expression signature, the ClinicoMolecular Triad Classification, may improve prediction and prognostication of breast cancer at the time of diagnosis
GSE17372_top500tf - GSE17372 - SiGN-BN HC+BootstrapMolecular Classification of AIDS-Related Lymphomas [including third-party data]
GSE17705_top500tf - GSE17705 - SiGN-BN HC+BootstrapEndocrine Sensitivity Index Validation Dataset
GSE17913_top500tf - GSE17913 - SiGN-BN HC+BootstrapEffects of Cigarette Smoke on the Human Oral Mucosal Transcriptome
GSE17951_top500tf - GSE17951 - SiGN-BN HC+BootstrapGene expression analysis of prostate cancer samples using Affymetrix U133Plus2 array
GSE18684_top500tf - GSE18684 - SiGN-BN HC+BootstrapFine mapping of androgen regulated genes in LNCaP cells
GSE18842_top500tf - GSE18842 - SiGN-BN HC+BootstrapGene expression analysis of human lung cancer and control samples
GSE19027_top500tf - GSE19027 - SiGN-BN HC+BootstrapAntioxidant response gene expression in the bronchial airway epithelial cells of smokers at risk for lung cancer
GSE19069_top500tf - GSE19069 - SiGN-BN HC+BootstrapMolecular signatures in peripheral T-cell lymphoma (PTCL)
GSE19188_top500tf - GSE19188 - SiGN-BN HC+BootstrapExpression data for early stage NSCLC
GSE19274_top500tf - GSE19274 - SiGN-BN HC+BootstrapExpression profiling in Neuroblastoma Primary tumors and Cell lines
GSE19417_top500tf - GSE19417 - SiGN-BN HC+BootstrapHuman esophageal adenocarcinomas
GSE19494_top500tf - GSE19494 - SiGN-BN HC+BootstrapSubcutaneous adipose tissue (SAT) gene expression patterns between weight control and regaining weight subjects
GSE19615_top500tf - GSE19615 - SiGN-BN HC+BootstrapIntegrated genomic and function characterization of the 8q22 gain
GSE19804_top500tf - GSE19804 - SiGN-BN HC+BootstrapGenome-wide screening of transcriptional modulation in non-smoking female lung cancer in Taiwan
GSE20181_top500tf - GSE20181 - SiGN-BN HC+BootstrapLetrozole (Femara) early and late responses to treatment
GSE20189_top500tf - GSE20189 - SiGN-BN HC+BootstrapA gene expression signature from peripheral whole blood for stage I lung adenocarcinoma
GSE20194_top500tf - GSE20194 - SiGN-BN HC+BootstrapMAQC-II Project: human breast cancer (BR) data set
GSE20257_top500tf - GSE20257 - SiGN-BN HC+BootstrapSmoking-induced Disarray of the Apical Junctional Complex Gene Expression Architecture in the Human Airway Epithelium
GSE20271_top500tf - GSE20271 - SiGN-BN HC+BootstrapExpression data from breast cancer FNA biopsies from patients
GSE2034_top500tf - GSE2034 - SiGN-BN HC+BootstrapBreast cancer relapse free survival
GSE20685_top500tf - GSE20685 - SiGN-BN HC+BootstrapMicroarray-based molecular subtyping of breast cancer
GSE20842_top500tf - GSE20842 - SiGN-BN HC+BootstrapMutated KRAS induces overexpression of DUSP4, a MAP-kinase phosphatase, and SMYD3, a histone methyltransferase, in rectal carcinomas
GSE21029_top500tf - GSE21029 - SiGN-BN HC+BootstrapThe lymph node microenvironment promotes B-cell receptor signaling, NF-κB activation, and tumor proliferation in chronic lymphocytic leukemia (CLL)
GSE21050_top500tf - GSE21050 - SiGN-BN HC+BootstrapExpression data from Complex genetics sarcomas (cohort 1 and 2)
GSE21122_top500tf - GSE21122 - SiGN-BN HC+BootstrapWhole-transcript expression data for soft-tissue sarcoma tumors and control normal fat specimens
GSE2113_top500tf - GSE2113 - SiGN-BN HC+BootstrapPlasma cell dyscrasias expression profiles associated with distinct IGH translocations in multiple myeloma
GSE21452_top500tf - GSE21452 - SiGN-BN HC+BootstrapIntegrated genomic profiling in mantle cell lymphoma
GSE21501_top500tf - GSE21501 - SiGN-BN HC+BootstrapA six-gene signature predicts survival of patients with localized pancreatic ductal adenocarcinoma
GSE22093_top500tf - GSE22093 - SiGN-BN HC+BootstrapExpression data from breast cancer FNA biopsies from patients
GSE22138_top500tf - GSE22138 - SiGN-BN HC+BootstrapExpression Data from Uveal Melanoma primary tumors.
GSE22153_top500tf - GSE22153 - SiGN-BN HC+BootstrapGene Experssion Profiling-Based Identification of Molecular Subtypes in Stage IV Melanoma with Different Clinical Outcome (test set)
GSE22541_top500tf - GSE22541 - SiGN-BN HC+BootstrapExpression data from pulmonary metastases and primary tumors of clear-cell renal cell carcinoma (ccRCC) with different disease-free survivals
GSE22597_top500tf - GSE22597 - SiGN-BN HC+BootstrapExpression data from Fine Needle Aspiration (FNA) biopsies from breast cancer patients
GSE2294_top500tf - GSE2294 - SiGN-BN HC+BootstrapA Modular Analysis of Breast Cancer Reveals a Novel Low-Grade Molecular Signature in Estrogen Receptor-Positive Tumors
GSE23177_top500tf - GSE23177 - SiGN-BN HC+BootstrapPrediction of lymph node involvement in breast cancer from primary tumor tissue using gene expression profiling and miRNAs.
GSE23806_top500tf - GSE23806 - SiGN-BN HC+BootstrapExpression data of glioblastoma stem-like (GS) cell lines, conventional glioma cell lines and primary tumors
GSE23980_top500tf - GSE23980 - SiGN-BN HC+BootstrapExpression data from human soft tissue sarcomas with complex genomics
GSE23988_top500tf - GSE23988 - SiGN-BN HC+BootstrapExpression data from breast cancer FNA biopsies from patients (US samples)
GSE24080_top500tf - GSE24080 - SiGN-BN HC+BootstrapMAQC-II Project: Multiple myeloma (MM) data set
GSE24124_top500tf - GSE24124 - SiGN-BN HC+BootstrapMajor gene partners of a favorable biomarker in ER(+) breast cancer
GSE24185_top500tf - GSE24185 - SiGN-BN HC+BootstrapGene transcription signature of obesity in breast cancer
GSE25055_top500tf - GSE25055 - SiGN-BN HC+BootstrapDiscovery cohort for genomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
GSE25065_top500tf - GSE25065 - SiGN-BN HC+BootstrapValidation cohort for genomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
GSE25066_top500tf - GSE25066 - SiGN-BN HC+BootstrapGenomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
GSE25136_top500tf - GSE25136 - SiGN-BN HC+BootstrapOptimizing molecular signatures for prostate cancer recurrence
GSE2603_top500tf - GSE2603 - SiGN-BN HC+BootstrapSubpopulations of MDA-MB-231 and Primary Breast Cancers
GSE26712_top500tf - GSE26712 - SiGN-BN HC+BootstrapA Gene Signature Predicting for Survival in Suboptimally Debulked Patients with Ovarian Cancer
GSE27155_top500tf - GSE27155 - SiGN-BN HC+BootstrapHuman thyroid adenomas, carcinomas, and normals
GSE27562_top500tf - GSE27562 - SiGN-BN HC+BootstrapExpression data from human PBMCs from breast cancer patients and controls
GSE2841_top500tf - GSE2841 - SiGN-BN HC+BootstrapExpression Profiling of pheochromocytomas of various genetic origins
GSE28497_top500tf - GSE28497 - SiGN-BN HC+BootstrapNew markers for minimal residual disease detection in acute lymphoblastic leukemia
GSE28821_top500tf - GSE28821 - SiGN-BN HC+BootstrapLaser-capture microdissected invasive micropapillary carcinomas of the breast
GSE2912_top500tf - GSE2912 - SiGN-BN HC+BootstrapMolecular classification of multiple myeloma
GSE29288_top500tf - GSE29288 - SiGN-BN HC+BootstrapComparison between cell lines from 9 different cancer tissue (NCI-60) (Agilent WG platform)
GSE29598_top500tf - GSE29598 - SiGN-BN HC+BootstrapA Methodology for Utilization of Predictive Genomic Signatures in FFPE Samples
GSE29683_top500tf - GSE29683 - SiGN-BN HC+BootstrapCoexpression of Normally Incompatible Developmental Pathways in Retinoblastoma Genesis [human tumor/cell line data]
GSE30240_top500tf - GSE30240 - SiGN-BN HC+BootstrapExpression data from 5 human cell lines exposed to IR (5 Gy)
GSE30929_top500tf - GSE30929 - SiGN-BN HC+BootstrapWhole-transcript expression data for liposarcoma
GSE3141_top500tf - GSE3141 - SiGN-BN HC+BootstrapLung Cancer Dataset
GSE3149_top500tf - GSE3149 - SiGN-BN HC+BootstrapOvarian Cancer Dataset
GSE3151_top500tf - GSE3151 - SiGN-BN HC+BootstrapOncogene Signature Dataset
GSE31519_top500tf - GSE31519 - SiGN-BN HC+BootstrapA Clinically Relevant Gene Signature in Triple-Negative and Basal-Like Breast Cancer
GSE31547_top500tf - GSE31547 - SiGN-BN HC+BootstrapMSKCC-A Primary Lung Cancer Specimens
GSE3167_top500tf - GSE3167 - SiGN-BN HC+BootstrapClassification of carcinoma in situ lesions in human bladder cancer
GSE32269_top500tf - GSE32269 - SiGN-BN HC+BootstrapExpression data for primary localized prostate cancer versus castration-resistant bone metastatic prostate cancer
GSE32448_top500tf - GSE32448 - SiGN-BN HC+BootstrapCPDR tumor-benign 80 genechip dataset
GSE32474_top500tf - GSE32474 - SiGN-BN HC+BootstrapComparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix U133 Plus 2.0)
GSE3726_top500tf - GSE3726 - SiGN-BN HC+BootstrapPrognostic gene signatures can be measured with samples stored in RNAlater
GSE4115_top500tf - GSE4115 - SiGN-BN HC+BootstrapAirway Epithelial Gene Expression Diagnostic for the Evaluation of Smokers with Suspect Lung Cancer
GSE4183_top500tf - GSE4183 - SiGN-BN HC+BootstrapInflammation, adenoma and cancer: objective classification of colon biopsy specimens with gene expression signature
GSE4290_top500tf - GSE4290 - SiGN-BN HC+BootstrapExpression data of glioma samples from Henry Ford Hospital
GSE4459_top500tf - GSE4459 - SiGN-BN HC+BootstrapGene expression signature and the prediction of lymph node metastases
GSE4536_top500tf - GSE4536 - SiGN-BN HC+BootstrapTumor stem cells more closely mirror the phenotype and genotype of primary human tumors than do cancer cell lines
GSE4554_top500tf - GSE4554 - SiGN-BN HC+BootstrapGene expression signature of colorectal cancer with microsatellite instability.
GSE4573_top500tf - GSE4573 - SiGN-BN HC+BootstrapGene expression signatures for predicting prognosis of squamous cell lung carcinomas
GSE4581_top500tf - GSE4581 - SiGN-BN HC+BootstrapGene Expression Profiles of Multiple Myeloma (N=414) Before Treatment
GSE4823_top500tf - GSE4823 - SiGN-BN HC+BootstrapComparison of normal breast epithelium and stroma from reduction and I.D.C. cases
GSE5107_top500tf - GSE5107 - SiGN-BN HC+BootstrapDistinct Transcription Profiles of Primary and Secondary Glioblastomas
GSE5327_top500tf - GSE5327 - SiGN-BN HC+BootstrapBreast cancer relapse free survival and lung metastasis free survival
GSE5364_top500tf - GSE5364 - SiGN-BN HC+BootstrapA Precisely Regulated Gene Expression Cassette Potently Modulates Metastasis and Survival in Multiple Solid Cancers
GSE5462_top500tf - GSE5462 - SiGN-BN HC+BootstrapLetrozole (Femara) early response to treatment
GSE5846_top500tf - GSE5846 - SiGN-BN HC+BootstrapNCI-60 Cancer Cell Line
GSE5847_top500tf - GSE5847 - SiGN-BN HC+BootstrapTumor and stroma from breast by LCM
GSE5851_top500tf - GSE5851 - SiGN-BN HC+BootstrapPhase II exploratory pharmacogenomics study of cetuximab monotherapy in patients with advanced metastatic CRC
GSE5900_top500tf - GSE5900 - SiGN-BN HC+BootstrapGene Expression of Bone Marrow Plasma Cells from Healthy Donors (N=22), MGUS (N=44), and Smoldering Myeloma (N=12)
GSE6008_top500tf - GSE6008 - SiGN-BN HC+BootstrapHuman ovarian tumors and normal ovaries
GSE6338_top500tf - GSE6338 - SiGN-BN HC+BootstrapGene expression analysis of Peripheral T-cell Lymphoma/Unspecified
GSE6365_top500tf - GSE6365 - SiGN-BN HC+BootstrapDistinct transcriptional and genetic features associated with chromosome 13 deletion in multiple myeloma
GSE6401_top500tf - GSE6401 - SiGN-BN HC+BootstrapUp-regulation of translational machinery and distinct genetic subgroups characterize hyperdiploidy in multiple myeloma
GSE6462_top500tf - GSE6462 - SiGN-BN HC+BootstrapMCF7 dose response
GSE6465_top500tf - GSE6465 - SiGN-BN HC+BootstrapExpression data of Hepatocellular Carcinoma
GSE6477_top500tf - GSE6477 - SiGN-BN HC+BootstrapExpression data from different stages of plasma cell neoplasm
GSE6481_top500tf - GSE6481 - SiGN-BN HC+BootstrapGene Expression Analysis of Soft Tissue Sarcomas: Characterization & Reclassification of Malignant Fibrous Histiocytoma
GSE6691_top500tf - GSE6691 - SiGN-BN HC+BootstrapGene expression profiling of B lymphocytes and plasma cells from WaldenstrÖm’s macroglobulinemia.
GSE6956_top500tf - GSE6956 - SiGN-BN HC+BootstrapTumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men
GSE7208_top500tf - GSE7208 - SiGN-BN HC+BootstrapExpression data from 59 human colon tumor tissue samples
GSE7390_top500tf - GSE7390 - SiGN-BN HC+BootstrapStrong Time Dependence of the 76-Gene Prognostic Signature
GSE7553_top500tf - GSE7553 - SiGN-BN HC+BootstrapGene Expression Patterns Involved in the Malignant Transformation and Progression of Metastatic Melanoma
GSE7670_top500tf - GSE7670 - SiGN-BN HC+BootstrapExpression data from Lung cancer
GSE7696_top500tf - GSE7696 - SiGN-BN HC+BootstrapGlioblastoma from a homogenous cohort of patients treated within clinical trial
GSE8141_top500tf - GSE8141 - SiGN-BN HC+BootstrapExpression data from MCF7 wt and MCF7/HER2-18 xenografts
GSE8332_top500tf - GSE8332 - SiGN-BN HC+BootstrapDeath receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL
GSE8401_top500tf - GSE8401 - SiGN-BN HC+BootstrapGene Signature for Aggression of Melanoma Metastases - Melanoma Metastasis
GSE8481_top500tf - GSE8481 - SiGN-BN HC+BootstrapVarious human cell types
GSE8671_top500tf - GSE8671 - SiGN-BN HC+BootstrapTranscriptome profile of human colorectal adenomas.
GSE8835_top500tf - GSE8835 - SiGN-BN HC+BootstrapChronic lymphocytic leukemia cells induce changes in gene expression of CD4 and CD8 T cells.
GSE8894_top500tf - GSE8894 - SiGN-BN HC+BootstrapPrediction of Recurrence-Free Survival in Postoperative NSCLC Patients—a Useful Prospective Clinical Practice
GSE9169_top500tf - GSE9169 - SiGN-BN HC+BootstrapGene expression during neuronal differentiation in two subtypes of SH-SY5Y
GSE9348_top500tf - GSE9348 - SiGN-BN HC+BootstrapExpression data from healthy controls and early stage CRC patient's tumor
GSE9992_top500tf - GSE9992 - SiGN-BN HC+BootstrapMolecular and transcriptional characterization of chromosome 17p loss in chronic lymphocytic leukemia, experiment A
GSE8139_top500tf - GSE8139 - SiGN-BN HC+BootstrapExpression data from MCF7/HER2-18 xenografts
GSE8218_top500tf - GSE8218 - SiGN-BN HC+BootstrapGene expression data from prostate cancer samples
GSE9014_top500tf - GSE9014 - SiGN-BN HC+BootstrapTumor-associated stroma derived from primary clinical breast cancer samples
GSE9309_top500tf - GSE9309 - SiGN-BN HC+BootstrapRecovery of biological information under heterogeneous experimental conditions using subgroup standardization.
GSE9750_top500tf - GSE9750 - SiGN-BN HC+BootstrapIdentification of gene expression profiles in cervical cancer

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