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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene

VPS35

Entrez Gene ID55737 (See on NCBI)
Descriptionvacuolar protein sorting 35 homolog (S. cerevisiae)
Gene Synonyms MEM3, PARK17
Node consisting of this GeneVPS35

Networks including this gene


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GSE14095_top8000 - GSE14095 - SiGN-BN NNSRGene expression signature and the prediction of liver metastasis in colorectal cancer by DNA microarray
GSE10063_top8000 - GSE10063 - SiGN-BN NNSREffects of tobacco smoke on gene expression and cellular pathways in a cellular model of oral leukoplakia
GSE10072_top8000 - GSE10072 - SiGN-BN NNSRGene expression signature of cigarette smoking and its role in lung adenocarcinoma development and survival
GSE10245_top8000 - GSE10245 - SiGN-BN NNSRGene expression differences between adenocarcinoma and squamous cell carcinoma in human NSCLC
GSE10320_top8000 - GSE10320 - SiGN-BN NNSRPredicting Relapse in Favorable Histology Wilms Tumor Using Gene Expression
GSE10327_top8000 - GSE10327 - SiGN-BN NNSRmRNA expression data of 62 human medulloblastoma tumors
GSE10358_top8000 - GSE10358 - SiGN-BN NNSRDiscovery and validation of expression data for the Genomics of Acute Myeloid Leukemia Program at Washington University.
GSE10445_top8000 - GSE10445 - SiGN-BN NNSRMERLION LUNG CANCER STUDY
GSE10780_top8000 - GSE10780 - SiGN-BN NNSRProliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue
GSE10797_top8000 - GSE10797 - SiGN-BN NNSRTranscriptomes of breast epithelium and stroma in normal reduction mammoplasty and invasive breast cancer patients.
GSE10810_top8000 - GSE10810 - SiGN-BN NNSRGene expression signatures in breast cancer distinguish phenotype charact., histological subtypes, and tumor invasivness
GSE10927_top8000 - GSE10927 - SiGN-BN NNSRHuman adrenocortical carcinomas (33), adenomas (22), and normal adrenal cortex (10), on Affymetrix HG_U133_plus_2 arrays
GSE11135_top8000 - GSE11135 - SiGN-BN NNSRThe MILE (Microarray Innovations In LEukemia) study pre-phase
GSE11151_top8000 - GSE11151 - SiGN-BN NNSRGene expression data from different types of renal tumors and normal kidneys
GSE11482_top8000 - GSE11482 - SiGN-BN NNSRRhabdoid Tumor: Gene Expression Clues to Pathogenesis and Potential Therapeutic Targets
GSE11729_top8000 - GSE11729 - SiGN-BN NNSRH1299 EGF and Iressa stimulation
GSE11869_top8000 - GSE11869 - SiGN-BN NNSRThe genomic response of a human uterine endometrial adenocarcinoma cell line to 17alpha-ethynyl estradiol.
GSE12195_top8000 - GSE12195 - SiGN-BN NNSRMutations of multiple genes deregulate the NF-kB pathway in diffuse large B cell lymphoma
GSE12276_top8000 - GSE12276 - SiGN-BN NNSRExpression data from primary breast tumors
GSE12391_top8000 - GSE12391 - SiGN-BN NNSRMelanoma: comparison between common nevi, radial/vertical growth phase melanoma, metastases and dysplastic nevi
GSE12428_top8000 - GSE12428 - SiGN-BN NNSRCurrent smoking-specific gene expression signature in bronchial epithelium is enhanced in squamous cell lung cancer
GSE12453_top8000 - GSE12453 - SiGN-BN NNSROrigin and pathogenesis of lymphocyte-predominant Hodgkin lymphoma as revealed by global gene expression analysis
GSE12460_top8000 - GSE12460 - SiGN-BN NNSRExpression profiling of neuroblastic tumors
GSE12470_top8000 - GSE12470 - SiGN-BN NNSRGene expression profiles of serous ovarian cancer samples
GSE12472_top8000 - GSE12472 - SiGN-BN NNSRA COPD-related gene expression signature in squamous cell lung cancer
GSE12790_top8000 - GSE12790 - SiGN-BN NNSRGene expression profiling of human breast cancers and cancer cell lines
GSE12945_top8000 - GSE12945 - SiGN-BN NNSRExpression data from colorectal cancers
GSE13067_top8000 - GSE13067 - SiGN-BN NNSRExpression data from primary colorectal cancers
GSE13168_top8000 - GSE13168 - SiGN-BN NNSREffects of glucocorticoids and Protein Kinase A on growth factor- and 1beta- regulated gene
GSE13255_top8000 - GSE13255 - SiGN-BN NNSRGene Expression Profiles in Peripheral Blood Mononuclear Cells Can Distinguish Patients with NonSmall Cell Lung Cancer.
GSE13294_top8000 - GSE13294 - SiGN-BN NNSRExpression data from primary colorectal cancers
GSE13507_top8000 - GSE13507 - SiGN-BN NNSRPredective Value of Prognosis-Related Gene Expression Study in Primary Bladder Cancer
GSE13591_top8000 - GSE13591 - SiGN-BN NNSRIntegrated genomics approach to detect allelic imbalances in multiple myeloma
GSE13861_top8000 - GSE13861 - SiGN-BN NNSRGene expression signature-based novel prognostic risk score in gastric cancer
GSE13898_top8000 - GSE13898 - SiGN-BN NNSRRobust prognostic biomarkers for EAC identified by systems-level characterization of tumor transcriptome
GSE14206_top8000 - GSE14206 - SiGN-BN NNSRAnalysis of ETS gene expression patterns uncovers novel ETS mediated gene silencing pathways in prostate cancers
GSE14333_top8000 - GSE14333 - SiGN-BN NNSRExpression data from 290 primary colorectal cancers
GSE14786_top8000 - GSE14786 - SiGN-BN NNSRGene expression analysis of cancer-related fatigue in whole blood from breast cancer survivors
GSE14814_top8000 - GSE14814 - SiGN-BN NNSRPrognostic and Predictive Gene Signature for Adjuvant Chemotherapy in Resected Non-Small Cell Lung Cancer
GSE14879_top8000 - GSE14879 - SiGN-BN NNSRGene expression study of anaplastic large cell lymphomas: cellular origin, pathogenesis and relation to Hodgkin lymphoma
GSE14925_top8000 - GSE14925 - SiGN-BN NNSRExpression data from Non small cell lung cancer cell lines
GSE15395_top8000 - GSE15395 - SiGN-BN NNSRHCT116 tumor cells treated with a CDK inhibitor
GSE15459_top8000 - GSE15459 - SiGN-BN NNSRGastric Cancer Project '08 (Singapore Patient Cohort)
GSE15471_top8000 - GSE15471 - SiGN-BN NNSRWhole-Tissue Gene Expression Study of Pancreatic Ductal Adenocarcinoma
GSE15765_top8000 - GSE15765 - SiGN-BN NNSRIdentification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma
GSE15966_top8000 - GSE15966 - SiGN-BN NNSRGene expression signature predictive of rapid response to imatinib mesylate in Gastrointestinal Stromal Tumor (GIST)
GSE16120_top8000 - GSE16120 - SiGN-BN NNSRGene profiling, mutations and expression of epidermal growth factor receptor in androgen-dependent prostate cancer
GSE16237_top8000 - GSE16237 - SiGN-BN NNSRExpression data of human neuroblastoma tissue samples
GSE16382_top8000 - GSE16382 - SiGN-BN NNSRExpression data from complex genetic sarcomas
GSE16391_top8000 - GSE16391 - SiGN-BN NNSRGGI: a potential predictor of relapse for endocrine-treated breast cancer patients in the BIG 1-98 trial
GSE16446_top8000 - GSE16446 - SiGN-BN NNSRPredicting the efficacy of anthracyclines in breast cancer (BC) patients: The results of the TOP trial
GSE16455_top8000 - GSE16455 - SiGN-BN NNSRIndolent MCL identified by genomic and gene expression profiling
GSE16515_top8000 - GSE16515 - SiGN-BN NNSRExpression data from Mayo Clinic Pancreatic Tumor and Normal samples
GSE16757_top8000 - GSE16757 - SiGN-BN NNSRGene expression study in hepatocellular carcinoma
GSE17372_top8000 - GSE17372 - SiGN-BN NNSRMolecular Classification of AIDS-Related Lymphomas [including third-party data]
GSE17536_top8000 - GSE17536 - SiGN-BN NNSRMetastasis Gene Expression Profile Predicts Recurrence and Death in Colon Cancer Patients (Moffitt Samples)
GSE17537_top8000 - GSE17537 - SiGN-BN NNSRMetastasis Gene Expression Profile Predicts Recurrence and Death in Colon Cancer Patients (VMC Samples)
GSE17764_top8000 - GSE17764 - SiGN-BN NNSRExpression profiles associated with BRCA1 and BRCA2 mutation status in familial breast cancer patients
GSE17913_top8000 - GSE17913 - SiGN-BN NNSREffects of Cigarette Smoke on the Human Oral Mucosal Transcriptome
GSE17920_top8000 - GSE17920 - SiGN-BN NNSRExpression data of diagnostic biopsy samples from Hodgkin lymphoma patients
GSE18088_top8000 - GSE18088 - SiGN-BN NNSRCorrelation of molecular profiles and clinical outcome of stage UICC II colon cancer patients
GSE18105_top8000 - GSE18105 - SiGN-BN NNSRStage II and stage III colorectal cancer
GSE18497_top8000 - GSE18497 - SiGN-BN NNSRDiagnosis-relapse in ALL
GSE18520_top8000 - GSE18520 - SiGN-BN NNSRWhole-genome oligonucleotide expression analysis of papillary serous ovarian adenocarcinomas
GSE18521_top8000 - GSE18521 - SiGN-BN NNSRA gene signature predictive for outcome in advanced ovarian cancer identifies a novel survival factor: MAGP2
GSE18842_top8000 - GSE18842 - SiGN-BN NNSRGene expression analysis of human lung cancer and control samples
GSE18864_top8000 - GSE18864 - SiGN-BN NNSRTumor expression data from neoadjuvant trial of cisplatin monotherapy in triple negative breast cancer patients
GSE19027_top8000 - GSE19027 - SiGN-BN NNSRAntioxidant response gene expression in the bronchial airway epithelial cells of smokers at risk for lung cancer
GSE19188_top8000 - GSE19188 - SiGN-BN NNSRExpression data for early stage NSCLC
GSE19784_top8000 - GSE19784 - SiGN-BN NNSRGene expression profiling of multiple myeloma patients included in the HOVON65/GMMG-HD4 trial
GSE19804_top8000 - GSE19804 - SiGN-BN NNSRGenome-wide screening of transcriptional modulation in non-smoking female lung cancer in Taiwan
GSE20257_top8000 - GSE20257 - SiGN-BN NNSRSmoking-induced Disarray of the Apical Junctional Complex Gene Expression Architecture in the Human Airway Epithelium
GSE20271_top8000 - GSE20271 - SiGN-BN NNSRExpression data from breast cancer FNA biopsies from patients
GSE20685_top8000 - GSE20685 - SiGN-BN NNSRMicroarray-based molecular subtyping of breast cancer
GSE20842_top8000 - GSE20842 - SiGN-BN NNSRMutated KRAS induces overexpression of DUSP4, a MAP-kinase phosphatase, and SMYD3, a histone methyltransferase, in rectal carcinomas
GSE20916_top8000 - GSE20916 - SiGN-BN NNSRModeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data
GSE21050_top8000 - GSE21050 - SiGN-BN NNSRExpression data from Complex genetics sarcomas (cohort 1 and 2)
GSE21452_top8000 - GSE21452 - SiGN-BN NNSRIntegrated genomic profiling in mantle cell lymphoma
GSE21510_top8000 - GSE21510 - SiGN-BN NNSRClinical Significance of Osteoprotegerin Expression in Human Colorectal Cancer
GSE21653_top8000 - GSE21653 - SiGN-BN NNSRA gene expression signature identifies two prognostic subgroups of basal breast cancer
GSE22138_top8000 - GSE22138 - SiGN-BN NNSRExpression Data from Uveal Melanoma primary tumors.
GSE22541_top8000 - GSE22541 - SiGN-BN NNSRExpression data from pulmonary metastases and primary tumors of clear-cell renal cell carcinoma (ccRCC) with different disease-free survivals
GSE23120_top8000 - GSE23120 - SiGN-BN NNSRBasal gene expression data from Human Variation Panel
GSE23177_top8000 - GSE23177 - SiGN-BN NNSRPrediction of lymph node involvement in breast cancer from primary tumor tissue using gene expression profiling and miRNAs.
GSE23553_top8000 - GSE23553 - SiGN-BN NNSRGene expression changes with induction of in-vitro platinum-resistance in ovarian cancer cell lines.
GSE23593_top8000 - GSE23593 - SiGN-BN NNSRIntratumor Heterogeneity and Precision of Microarray-Based Predictors of Breast Cancer Biology and Clinical Outcome
GSE23878_top8000 - GSE23878 - SiGN-BN NNSRGenome Wide Expression Analysis of Middle Eastern Colorectal Cancer Reveals FOXM1 as a Novel Target for Cancer Therapy
GSE23980_top8000 - GSE23980 - SiGN-BN NNSRExpression data from human soft tissue sarcomas with complex genomics
GSE24124_top8000 - GSE24124 - SiGN-BN NNSRMajor gene partners of a favorable biomarker in ER(+) breast cancer
GSE26599_top8000 - GSE26599 - SiGN-BN NNSRGene expression profile in response to doxorubicin-rapamycin combined treatment of HER-2 overexpressing human mammary epithelial cell lines
GSE26639_top8000 - GSE26639 - SiGN-BN NNSRExpression Data from 226 patients of the REMAGUS02 trial
GSE26712_top8000 - GSE26712 - SiGN-BN NNSRA Gene Signature Predicting for Survival in Suboptimally Debulked Patients with Ovarian Cancer
GSE26906_top8000 - GSE26906 - SiGN-BN NNSRAPC colon stage II
GSE27480_top8000 - GSE27480 - SiGN-BN NNSRGene-expression analysis of Oncostatin-M (OSM) signalling in cervical squamous cell carcinomas over-expressing the Oncostatin-M receptor (OSMR)
GSE27562_top8000 - GSE27562 - SiGN-BN NNSRExpression data from human PBMCs from breast cancer patients and controls
GSE2841_top8000 - GSE2841 - SiGN-BN NNSRExpression Profiling of pheochromocytomas of various genetic origins
GSE28821_top8000 - GSE28821 - SiGN-BN NNSRLaser-capture microdissected invasive micropapillary carcinomas of the breast
GSE29013_top8000 - GSE29013 - SiGN-BN NNSRRobust Gene Expression Signature from Formalin-Fixed Paraffin-Embedded Samples Predicts Prognosis of Non-Small-Cell Lung Cancer Patients
GSE2912_top8000 - GSE2912 - SiGN-BN NNSRMolecular classification of multiple myeloma
GSE29354_top8000 - GSE29354 - SiGN-BN NNSRMesothelioma tumor gene expression profiles
GSE2990_top8000 - GSE2990 - SiGN-BN NNSRGene Expression Profiling in Breast Cancer: Understanding the Molecular Basis of Histologic Grade To Improve Prognosis
GSE30784_top8000 - GSE30784 - SiGN-BN NNSRGene expression profiling of oral squamous cell carcinoma (OSCC)
GSE3141_top8000 - GSE3141 - SiGN-BN NNSRLung Cancer Dataset
GSE3151_top8000 - GSE3151 - SiGN-BN NNSROncogene Signature Dataset
GSE31547_top8000 - GSE31547 - SiGN-BN NNSRMSKCC-A Primary Lung Cancer Specimens
GSE31548_top8000 - GSE31548 - SiGN-BN NNSRMSKCC-B Primary Lung Cancer Specimens
GSE3167_top8000 - GSE3167 - SiGN-BN NNSRClassification of carcinoma in situ lesions in human bladder cancer
GSE32448_top8000 - GSE32448 - SiGN-BN NNSRCPDR tumor-benign 80 genechip dataset
GSE32474_top8000 - GSE32474 - SiGN-BN NNSRComparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix U133 Plus 2.0)
GSE3629_top8000 - GSE3629 - SiGN-BN NNSRMolecular Marker for predicting development of cancer in ulcerative colitis
GSE4115_top8000 - GSE4115 - SiGN-BN NNSRAirway Epithelial Gene Expression Diagnostic for the Evaluation of Smokers with Suspect Lung Cancer
GSE4183_top8000 - GSE4183 - SiGN-BN NNSRInflammation, adenoma and cancer: objective classification of colon biopsy specimens with gene expression signature
GSE4290_top8000 - GSE4290 - SiGN-BN NNSRExpression data of glioma samples from Henry Ford Hospital
GSE4459_top8000 - GSE4459 - SiGN-BN NNSRGene expression signature and the prediction of lymph node metastases
GSE4536_top8000 - GSE4536 - SiGN-BN NNSRTumor stem cells more closely mirror the phenotype and genotype of primary human tumors than do cancer cell lines
GSE4554_top8000 - GSE4554 - SiGN-BN NNSRGene expression signature of colorectal cancer with microsatellite instability.
GSE5206_top8000 - GSE5206 - SiGN-BN NNSRLarge-scale deployment of embryonic gene programming in human and murine colon cancer: a new target for intervention.
GSE5460_top8000 - GSE5460 - SiGN-BN NNSRPredicting Features of Breast Cancer with Gene Expression Patterns
GSE5846_top8000 - GSE5846 - SiGN-BN NNSRNCI-60 Cancer Cell Line
GSE6338_top8000 - GSE6338 - SiGN-BN NNSRGene expression analysis of Peripheral T-cell Lymphoma/Unspecified
GSE6365_top8000 - GSE6365 - SiGN-BN NNSRDistinct transcriptional and genetic features associated with chromosome 13 deletion in multiple myeloma
GSE6401_top8000 - GSE6401 - SiGN-BN NNSRUp-regulation of translational machinery and distinct genetic subgroups characterize hyperdiploidy in multiple myeloma
GSE6465_top8000 - GSE6465 - SiGN-BN NNSRExpression data of Hepatocellular Carcinoma
GSE6691_top8000 - GSE6691 - SiGN-BN NNSRGene expression profiling of B lymphocytes and plasma cells from WaldenstrÖm’s macroglobulinemia.
GSE6764_top8000 - GSE6764 - SiGN-BN NNSRGenome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma
GSE6791_top8000 - GSE6791 - SiGN-BN NNSRGene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers
GSE7553_top8000 - GSE7553 - SiGN-BN NNSRGene Expression Patterns Involved in the Malignant Transformation and Progression of Metastatic Melanoma
GSE7904_top8000 - GSE7904 - SiGN-BN NNSRExpression data from human breast tissue
GSE8218_top8000 - GSE8218 - SiGN-BN NNSRGene expression data from prostate cancer samples
GSE8671_top8000 - GSE8671 - SiGN-BN NNSRTranscriptome profile of human colorectal adenomas.
GSE8894_top8000 - GSE8894 - SiGN-BN NNSRPrediction of Recurrence-Free Survival in Postoperative NSCLC Patients—a Useful Prospective Clinical Practice
GSE9169_top8000 - GSE9169 - SiGN-BN NNSRGene expression during neuronal differentiation in two subtypes of SH-SY5Y
GSE9195_top8000 - GSE9195 - SiGN-BN NNSRPredicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen
GSE9348_top8000 - GSE9348 - SiGN-BN NNSRExpression data from healthy controls and early stage CRC patient's tumor
GSE9843_top8000 - GSE9843 - SiGN-BN NNSRGene expression profiling of 91 hepatocellular carcinomas with hepatitis C virus etiology
GSE9936_top8000 - GSE9936 - SiGN-BN NNSRExpression data from human breast cancer cells (MCF-7) coexpressing ERalpha and Erbeta, treated with phytoestrogens
GSE9992_top8000 - GSE9992 - SiGN-BN NNSRMolecular and transcriptional characterization of chromosome 17p loss in chronic lymphocytic leukemia, experiment A

(137 networks)