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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE3143_top500tf

DescriptionBreast Cancer Dataset
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE3143 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

TFAP2B
FOXA1
IRF4
SLC26A3
RB1
FOS
FOXC1
TFDP1
ZNF238
PEG3
HOXA9
ASCL1
MEOX2
ZIC1
DLX2
HOXB2
ZNF135
STAT1
CUX2
NR2F1
AR
PITX1
CITED1
NFATC4
HOXB5
RUNX1
CDKN2A
MSX2
HOXD8
NR4A2
ESR1
FOXF1
MAX
SIX1
GATA3
NR1D2
PGR
CBFA2T3
NR5A2
PRDM2
MEOX1
MLLT10
VAV1
SPI1
FOXJ1
SOX5
EGR2
HOXA5
TAF13
POU1F1
NPAS2
GTF2H2
RUNX1T1
SMAD5
ZSCAN12
SALL1
SIM2
TBX1
RUNX3
GABPB1
IRX5
NFATC3
NFE2L3
ZNF81
EGR3
PHTF1
RARA
ESRRG
ZNF197
ST18
MEF2C
FOXG1
TCF7L2
TAF1B
SNAI2
HESX1
GLI3
TAF4B
NFAT5
STAT2
HOXA2
TCF20
TADA2A
GATA2
ETV1
BCL6
ARID4A
SOX10
EPAS1
MYT1L
PLAG1
TAF4
SMAD6
TLX2
MEIS1
ELK4
OLIG2
NFIB
MNX1
SIM1
ZIC3
NEUROD1
HNF4G
ZNF192
TEAD1
ETV6
ETV4
REL
SOX11
THRA
HOXC4
NR4A1
NR4A3
MECOM
PRRX1
TFAP2A
NR2C2
SMAD3
POU3F2
PAX4
ZNF148
EN2
PKNOX1
ZNF165
TP53
MYF5
FOXF2
GATA6
NR1I3
TBR1
ZNF268
TFCP2
TWIST1
PCGF2
RELA
MYCN
TBX10
RARB
TRIM22
ATF6B
POU3F4
FOXE1
ZNF154
JUNB
NR2C1
TFEC
HOXA1
KLF12
ZNF169
PPARG
ZNF274
HLF
MYC
CREB1
HOXB3
MAF
MMP14
FOXD1
NFIA
BATF
PTTG1
BLZF1
NR2E1
LMX1B
SIX3
STAT5B
ARNTL
MITF
VTN
TBX2
WNT5A
TFDP2
NFE2
NFKB2
ZNF92
SATB2
C11orf9
SATB1
ARNT2
ZNF643
RFXAP
NFIX
FLI1
ATF7
NR1H4
PROX1
HOXB13
KLF11
SOX30
FOXN3
FOSB
HOXA4
MYBL2
ZNF140
PPARA
TP63
ALX1
STAT5A
ATF1
GLI2
ZNF41
MYCL1
ZNF175
ATF3
ZNF37A
TFAM
POU4F1
ZFP36L2
DLX4
PLSCR1
JUN
ETS1
GABPA
CREB5
ZNF174
ZNF80
RORC
ZNF33B
CLOCK
ZBTB25
TRIM25
POU4F2
IRF8
TCF21
SP4
PRDM1
EMX1
RORA
WT1
TRIM29
PURA
ESR2
LHX1
FOXO4
TEF
E2F1
ONECUT2
E2F5
RORB
VDR
FOXM1
CBL
SOX21
ZKSCAN5
HOXD3
PAX8
POU6F2
HOXD9
RFX3
NR3C1
MEIS2
LEF1
KLF5
ZFP37
ELF1
CNOT8
HMGA2
IRF5
SP1
FOXD2
ATF2
MYOD1
TCF15
NKX3-2
NR2F6
DDIT3
ERG
NR1H2
ZNF132
ZNF500
PBX2
ZNF35
MYT1
UBN1
ONECUT1
PITX2
ZKSCAN1
ZNF91
FOXA2
NFIC
GBX2
POU3F1
PBX1
PDX1
BTG2
MYF6
SMAD4
ZNF217
LHX2
NFATC1
TCF7
GAS7
BRD8
HOXB1
AFF1
TSC22D2
FOXI1
CDX2
GCM1
RARG
EGR4
RUNX2
SOX15
HMX1
ETS2
E2F4
ZKSCAN4
ZNF45
NKX3-1
HES1
TCF4
NR1I2
MAFK
NR0B1
RCAN1
HR
KLF4
YY1
CREBZF
IRF2
TAL1
HIF1A
AEBP1
MAFF
LASS6
ETV3
LMO4
GATAD1
HINFP
HOXD1
ZNF263
ZNF24
PAX3
TAF12
PTH
RXRG
KDM5A
HOXB6
PBX3
NFIL3
CSDA
HOXD4
ASCL2
HNF1B
ISL1
ELF5
NFE2L2
CRX
SHOX
IKZF1
SOX9
PPARD
TCEAL1
GATA1
HOPX
SP140
OVOL1
SOX4
POU2F3
PHOX2B
HDAC1
CREB3L1
ZNF117
IRF1
NR2F2
POU2F2
ZNF202
CITED2
NR6A1
GATA4
XBP1
HMGA1
SUPT6H
NKX2-8
ETV5
HCLS1
HOXD10
ETV2
HNF1A
HIRA
RXRA
SMAD1
HOXC11
TCFL5
SMAD9
MTA1
SOLH
POU6F1
BHLHE40
TFEB
CTBP1
NRL
FOXK2
GTF2H4
SOX2
TFAP2C
SOX12
FOXO3
NR1H3
MXD1
ZNF167
KLF1
DBP
EVX1
ZNF75D
MYOG
CEBPD
NR2E3
HOXA10
ZEB1
CREBL2
THRB
HOXB7
SIX6
ZNF3
E2F6
MEIS3P1
ZBTB48
SMAD2
ZEB2
HNF4A
NKX2-5
HOXA11
ESRRB
E2F2
FOXN2
NPAS1
KLF10
ZIC2
TEAD4
SCAND2
TSC22D3
EGR1
IRF7
REST
ADNP2
CTNNB1
HMGB2
RFXANK
ZHX3
LZTR1
ZNF189
SCML2
HHEX
FEV
MSX1
TBX5
JUND
TGIF2
T
IRX3
NKX2-1
IRF6
SPIB
CUX1
YBX1
NR5A1
SREBF1
HDAC2
AHR
TAF5
CEBPA
SALL2
MBD1
BNC1
KLF6
CREB3L2
PAX6
ELK3
STAT4
CEBPB
ELF3
TSC22D1
RFX1
FOXC2
TCF3
BTAF1
SP3
ATF6
SUPT4H1
SNAPC2
PAX5
STAT3
ERF
KLF9
NFKB1
STAT6
SNAPC4
ELK1
IRF9
ELF4
PPBPL2
RCOR1
E2F3
KLF7
SPDEF
KDM5B
HSF2
AHCTF1
NR3C2