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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE29683_top500tf

DescriptionCoexpression of Normally Incompatible Developmental Pathways in Retinoblastoma Genesis [human tumor/cell line data]
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE29683 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

FOXG1
HMGA2
ISL1
PAX6
NR2E3
EPAS1
FOS
HOPX
POU4F2
BCL6
MITF
RXRG
BHLHE41
SALL1
SOX2
TRIM22
SOX11
TCF7L2
NR2E1
PRDM1
ZFPM2
THRB
EBF1
SOX7
MAFB
ST18
PRRX1
E2F7
MYT1L
ETS1
SIX6
PEG3
CEBPB
IRX3
NRL
PITX2
FOXC1
FOXP2
WNT5A
TFAP2B
ZIC2
EGR1
UHRF1
SOX6
RUNX1T1
CUX2
CRX
HCLS1
LHX3
TFEC
NR3C1
ZFP36L1
SOX9
MAF
EGR2
NEUROD1
CEBPD
TFAP2A
MYCN
NFIB
SOX8
ISL2
KLF4
C11orf9
LHX8
RORB
STAT3
NR2F2
SIX3
ELK3
PBX1
TCF19
NR2F1
MEF2C
E2F8
KLF3
ZNF367
HOXB3
ESRRG
KLF9
VSX1
TGIF1
ATF3
ZNF217
RB1
CSRNP3
ZNF83
ZIC1
BCL11B
HES1
FOSB
ONECUT2
SMAD9
ATF5
VTN
FOXM1
ZHX2
KCNH8
ETV1
NFIA
MYT1
FOXD1
STAT4
MEIS3P1
BHLHE40
DLX1
IKZF1
SATB2
LMO4
TCF7L1
PLSCR1
KLF11
SMAD6
ZBTB38
FLI1
HES6
SNAI2
C1orf85
TCF4
CREB3L2
GLIS3
DLX2
RUNX1
PROX1
BACH2
FOSL2
AEBP1
HLF
TSC22D3
SATB1
RUNX2
CDKN2A
FOXF2
OTX2
MYBL2
SMAD3
LHX4
POU4F1
ZEB2
ELF4
EGR3
TRIM28
NR4A2
MECOM
PAX3
STAT6
ZFP36L2
NFE2L2
PLAG1
PTTG1
E2F2
ENO1
LZTS1
HMGA1
SIX4
MEIS2
TRPS1
NANOGNB
HR
GATA6
MYC
NR3C2
LHX9
TRERF1
CREB5
FOXP1
HOXA2
PPARA
KLF5
SCAND3
ETV5
ARNTL2
HOXC9
ALX1
NFATC1
TFCP2L1
GAS7
SIM1
TBX2
STAT1
IRX5
IRF9
AHR
RAX2
SIX1
FEV
ELF1
TSHZ1
CSDA
ZSCAN16
E2F3
MYCL1
ZNF236
MAFF
LHX2
ARNTL
RCOR2
RAX
TSHZ3
FOXN4
CITED2
ETV6
MEIS1
HOXB2
HMG20B
ZNF165
E2F1
LASS6
PHOX2A
LEF1
JUNB
PBX4
SREBF1
RORA
TBX5
ZFHX4
IRF8
ESRRB
ASCL1
PHOX2B
TAF5
TEAD4
VAX2
MNX1
FOXO6
MSX1
TFDP1
NFYA
C5orf41
SOX4
TAF10
NR1D2
TWIST1
KLF2
TFEB
HOXA9
GATA5
SCML1
HAND1
BNC1
ZFHX3
FOXQ1
ETS2
RUNX3
SPEN
NR1H3
ZNF193
CREBZF
ZNF93
IRF5
GATA2
CBFA2T3
NANOG
EHF
HOXD3
DLX4
ZNF232
BCL3
PGBD1
KLF12
GLI3
ZSCAN12
SOX10
TP53
RCAN1
TRIM25
HEY2
ZNF277
PA2G4
BTG2
MLLT10
TBX1
TGIF2
NFAT5
PKNOX2
ZNF117
AFF1
RARB
FOXA3
TAF1B
ZNF643
SIX5
GABPB1
MYOD1
ZNF85
TCF12
TAF5L
HHEX
TEAD2
ZFP90
DRAP1
NFE2L3
FOXK2
MTA3
AHCTF1
TEAD3
HDAC2
ERG
RFXAP
VAV1
TLX2
SLC30A9
NPAS2
NOTCH1
DBP
SOX1
TP73
PHTF1
MAFK
MLL
HMGB1
ZNF256
ZBTB48
PITX1
CREB3L4
FOXN3
TCF25
SMAD4
MYNN
DMRT2
MXD1
ARID4A
MESP1
VDR
BACH1
ZNF33B
TSC22D1
NKX3-2
ZEB1
GATAD2B
CITED1
HEYL
LASS2
KLF10
TCF3
SMAD2
PCGF6
EDF1
STAT2
NFYB
SCAND1
CSRNP1
HMGB2
ZNF135
HOXC4
TADA3
FOXO3
FUBP1
C2orf3
PBX2
ZIC3
POU2F2
JUN
HOXA1
CEBPA
ZNF140
MSRB2
CNOT7
TAF4B
YBX1
CTBP1
NFIC
PRDM2
ATF6B
DMRT1
YEATS4
SOX12
IRF1
ZNF323
ZNF138
KDM5B
DLX6
GATA4
ZGPAT
ARNT
PPARG
GABPA
DDIT3
STAT5A
NR2F6
MTA1
ZNF131
ZNF92
ZNF268
NR4A3
SIX2
JUND
NEUROD2
MGA
TULP4
FOXO1
ZNF628
XBP1
ZFP37
SIN3A
ZKSCAN1
IRF2
SP4
GCFC1
HSF2
SOX5
LCOR
ZNF445
FOXN2
HEY1
NPAT
FOXP4
MZF1
TSHZ2
ZNF45
GATAD2A
GTF2H2
NKX3-1
TAF12
REL
KLF6
ZNF639
ZXDC
ZNF70
TRIM29
NOLC1
ECSIT
SMAD5
HIF3A
ZNF281
NFATC3
CNOT8
HOXB7
DMBX1
ZNF91
SP3
ELF3
HNRNPAB
ZNF75D
ELK4
NR1H2
SOLH
TFAM
ATF1
SCML2
SLC2A4RG
L3MBTL4
ELF2
ATF7
CREM
PLAGL2
RELA
ZNF207
IRF3
BLZF1
SP1
IRF6
HMX2
GTF2H4
MEF2A
TFAP2E
NR4A1
FOXL2
PURB
ZXDA
TFDP2
POU6F2
ZNF71
RBCK1
NFIX
SOX15
IRF7
SUPT6H
ZNF496
RCOR1
CBL
ZNF148
TCFL5
CREBL2
KLF7
ZHX1
SNAPC4
NKX2-5
ZSCAN18
ZNF167
THRA
ZSCAN2
MLX
POU2F1
PHF1
POU3F2
ARID3A
ATF2
YY1
PPARD
CREB1
TARDBP
HOXD4
NR2C1
POU6F1
ATF6
AATF
ZNF215
NFATC4
ZNF396