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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE29288_top500tf

DescriptionComparison between cell lines from 9 different cancer tissue (NCI-60) (Agilent WG platform)
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE29288 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

CDKN2A
LZTS1
LEF1
HOXA9
ELF3
HOXB2
FOXG1
PPARG
FOXL2
EHF
SOX17
SOX2
ZEB2
PBX1
PRRX2
FLI1
GLI3
IRX2
NR0B1
TCF4
SOX10
WNT5A
AEBP1
FOXQ1
RUNX3
OVOL1
FOXA1
TSHZ3
TWIST2
FOXF2
HOXB13
GRHL2
MNX1
HNF1B
FOXD1
ZIC1
HOXB5
HOXA7
HMGA2
SNAI2
ZSCAN18
AR
PAX3
EBF1
MITF
ARNT2
BHLHE41
IRF4
VAV1
SOX9
HOXB6
GLIS3
NR2F1
HOXB8
IRX3
SALL2
ZNF93
TRIM22
ZFHX4
BATF
BARX1
PAX8
TFAP2C
TBX15
SATB1
PITX2
CREB5
SOX11
LHX2
TBX2
HEYL
STAT5A
FOXA2
TP63
NKX2-1
TRPS1
ARNTL2
TRIM29
MSC
IRX4
HHEX
SALL1
ZNF256
MECOM
CEBPA
HOXA2
HOXB9
HOXA10
GSC
HEY1
LHX6
NR3C1
HCLS1
AHR
RHOXF2B
C12orf28
NFATC2
HOXA3
ZNF71
ASCL2
SOX5
MEF2C
HNF1A
RHOXF2
PKNOX2
NFE2
ETS1
HOXD8
ZIC5
HOPX
KLF15
GATA6
MAF
PITX1
HOXB3
EPAS1
IRF6
RORA
ZNF215
GAS7
TCF7L1
NR2F2
EGR3
HOXC10
GLI2
RUNX1T1
NFIA
NFIB
GATA3
HOXB4
BNC1
TCF7
POU3F2
SIM2
IKZF1
ETV1
IRF5
RARB
WT1
HOXA13
TFAP2A
BCL11B
HOXD3
TRERF1
ZFPM2
ZNF135
DLX1
HOXC8
ETV4
SIX1
SOX4
HOXD1
KLF5
ZNF167
EGR2
ESR1
HOXA4
HOXC13
RUNX2
MSX2
MLXIPL
ERG
MYCN
SOX6
DMRT2
ISL1
NFATC1
STAT6
HOXC9
HEY2
TFCP2
TWIST1
DLX2
NPAS2
KLF12
TFCP2L1
MEIS3P1
PGR
FOXE1
CDX2
STAT4
TP53
CBFA2T3
BATF3
SATB2
TCF15
SIX4
PLAG1
HDX
RXRG
SOX21
MKX
EGR1
GATA4
HOXD10
ETS2
HOXB7
EN1
ETV5
SCML1
HOXD11
ZIC2
JDP2
BATF2
ETV7
THRB
MMP14
FOSL1
ZEB1
SMAD9
KLF7
SOX13
IRF7
SOX8
FOXC1
NKX3-2
ONECUT2
MYT1
TBX1
IRX5
ZNF83
MEIS2
SCAND3
KLF9
RORB
CEBPD
MAFF
HOXD13
FOSL2
RUNX1
ISL2
HAND2
TLX2
TAL1
FOS
KLF2
L3MBTL4
ZNF134
NR4A2
NR4A1
KCNH8
MSX1
SMAD1
DLX4
BACH2
TSHZ2
ELF5
MEIS1
NANOG
PBX4
CITED1
ZFP42
HOXA5
HLF
GRHL3
NFE2L3
TBX3
CSRNP3
NFIX
HOXD9
SNAI3
NR3C2
ZFP37
PRDM1
ZNF238
ZNF35
HES1
KLF6
PROX1
ZNF323
ZBTB38
PRRX1
LASS6
MEIS3
SOX7
ZNF165
SIX6
RELB
SPDEF
C1orf85
FOXN3
ZNF175
HOXA11
EGR4
ALX1
ATF3
OLIG2
DMBX1
KLF3
BCL3
ZSCAN16
DMRT1
FOXN4
HIC1
LHX4
GATA1
MEOX1
FOXF1
FOXP1
EOMES
FOXJ1
JUN
POU5F1
DLX3
C11orf9
HIF1A
ISX
GATA5
ZFP36L1
MYCL1
MESP1
GATA2
TP73
ESX1
SMAD3
VDR
KLF4
ZNF140
HOXC12
KLF11
FOXO1
RCAN1
TFAP2B
CITED2
MAFB
ZFHX3
MGA
BHLHE40
PAX6
POU6F1
ZNF69
NR2E1
RB1
SOLH
ZNF287
MTA3
FOXP2
PLSCR1
TCF7L2
PGBD1
ZNF396
GBX2
TCEAL1
RORC
BTG2
ELK3
TSC22D1
HNF4A
NOTCH1
MEOX2
HR
HMGA1
ESRRG
STAT1
FOXA3
ARNTL
ELF4
IRF1
TSC22D3
MYC
LHX9
POU4F1
IRF8
NR1H3
PBX3
TEAD4
SP140
TGIF2LY
RERE
SPI1
FOXD2
POU2F3
BCL6
NPAS1
USF1
FOXD4
RXRA
HES6
POU2F2
ZNF91
ZFHX2
TEAD1
STRN3
E2F2
POU3F1
MXD1
ZIC3
POU3F4
HOMEZ
SCML2
ESRRB
IRX6
ESR2
STAT3
ZKSCAN1
ZNF154
ZNF33A
NKX6-1
MLL
CREB3L2
REST
ZNF643
SMAD6
IRF9
PPARA
SRF
DLX6
TSHZ1
VENTX
DBP
LMO4
CREB3L4
CREM
TFDP2
RARG
CSDA
SMAD4
HES5
KLF17
NKX2-5
ARID3A
ZXDA
TFAP4
POU4F2
MYT1L
KDM5B
XBP1
HOXC5
TEAD2
TGIF1
C5orf41
HOXC6
ZNF268
GSX2
NKX3-1
RCOR1
LHX1
JUNB
THRA
STAT5B
TAF7
ST18
TBX19
FUBP1
NR2E3
ZNF397
OTX1
HOXA6
UHRF1
ALS2CR8
ETV6
PRDM2
NFIC
CREB3L3
NEUROG1
ZNF219
MSL3
PTH
ATF6
TGIF2
ELF1
ZSCAN4
ZHX2
ZNF174
SLC2A4RG
FOXB1
LBX2
ZC3H8
ZNF169
HESX1
NR1H4
PHTF1
TFEB
NFAT5
ZNF138
HOXC4
ZSCAN12
PPARD
SIX2
ONECUT1
SHOX
CUX1
HNF4G
E2F5
HOXC11
HSF4
CBL
RFXAP
DDIT3
PPBPL2
VAX2
TEAD3
PEG3
NR1D2
AFF1
MTF1
NR1D1
ZNF132
ASCL1
CSRNP1