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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE25428_top500tf

DescriptionGene expression profiles of ovarian cancer cell lines in the presence and absence of a DNA methyltransferase inhibitor
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE25428 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

MECOM
TRIM22
CDKN2A
TRIM29
GRHL2
ZEB1
EPAS1
PAX8
HMGA2
NR2F1
SNAI2
HOXB6
HOXC10
DLX2
TFAP2A
TCF4
HOXB2
TFAP2C
PBX1
SOX9
HOXA9
ESR1
SOX2
NFIB
GATA3
ZFHX4
TBX2
TWIST1
NR2F2
SOX17
HEY1
MEIS2
ZIC1
KLF5
NR3C1
LHX2
KLF4
FOXD1
ELF3
HCLS1
GATA6
BHLHE41
WNT5A
FOSL1
MEIS1
HOXA5
ZNF91
PAX6
ZSCAN18
ZNF83
FOXG1
EGR1
ATF3
WT1
MITF
MAFF
FLI1
HOXA1
HES1
ETV1
HOXA10
JUN
AEBP1
HOXB5
HOXB7
MSX1
TP53
MEOX2
PLSCR1
RUNX1
ARNTL2
IRF6
SOX4
HHEX
NFE2L3
MYCN
TRPS1
KLF7
EHF
ETS2
LEF1
ZNF165
TP63
MEF2C
NPAS2
POU5F1B
SMAD6
ZIC3
C11orf9
SIX3
ZFPM2
MEOX1
ELK3
NR1D2
SOX15
CEBPD
ZHX2
RB1
HNF1B
SALL2
SATB2
FOXA2
BTG2
FOXF2
MSX2
SOX11
DDIT3
BHLHE40
ZNF238
NR3C2
ZNF93
SMAD3
SATB1
PPARG
FOXN3
SALL1
CITED2
ALX1
TCF7L1
NR5A2
SIX1
ARNT2
HOXC13
LMO4
RCAN1
BCL6
BACH2
E2F5
MAFB
KLF2
ARID3A
ZBTB38
VDR
ENO1
ETV5
TBX3
JUNB
KLF6
ISL1
TSC22D3
TFCP2
AHR
ZNF85
MEIS3P1
SCML1
STAT6
MYC
FOXE1
GLI3
NANOG
PITX2
FOXO1
PBX3
IRF9
CREM
ELF4
STRN3
SIM2
RUNX3
NFAT5
HOXD1
SIX2
MMP14
TCFL5
HOXA11
POU1F1
HOXD4
CEBPB
FOXA1
ZNF643
PEG3
RXRA
ZFP36L2
IRF7
LHX1
NR4A2
NKX3-1
NFIL3
SREBF1
CREB3L2
ZNF167
ZFHX3
MSRB2
FOS
ZNF117
FOXF1
GATA2
BCL3
PITX1
HOXC4
MBD1
ZNF277
IRX5
FOXL2
POU4F1
STAT1
TSC22D1
TAF12
RARB
MLLT10
ZFP36L1
ZNF323
ATF5
VTN
DBP
CBFB
FOSL2
BATF3
XBP1
GTF2I
CEBPA
HMG20B
KDM5B
PCGF2
NFIC
HMBOX1
ZNF215
LZTR1
SMAD1
CREB3L1
CREB5
CTBP1
TCF7L2
HOXC11
TGIF1
PHTF1
RERE
CSRNP2
NOTCH1
HOXD3
HMGA1
TCF12
CUX1
TCF3
SOX13
ARNTL
TEAD1
HOXA7
FOXM1
PKNOX1
MLL
PLAGL2
PURA
TEAD4
STAT3
HSF2
ZNF217
ZNF140
CNOT8
CREBL2
ZNF232
FOXO3
LHX6
ZNF274
E2F8
TBX1
KLF10
TFDP2
GATAD1
HOXA2
NR2C1
GLI2
ETS1
TGIF2
TFDP1
CREBZF
AFF1
CBFA2T2
RARA
NFYA
ONECUT2
RARG
ZXDC
MZF1
ZNF148
IRX4
C2orf3
IRF1
TARDBP
LZTS1
KLF9
GCFC1
GBX2
NFKB2
RFXANK
NFYC
KLF11
JUND
FUBP1
PLAG1
SPEN
RBCK1
SNAPC4
NR2E1
EGR3
ZNF133
ZNF189
SMAD4
NFKB1
TEAD3
GABPB1
HOXB9
SNAPC5
HOPX
PPARD
VAV1
ZNF3
CSRNP3
TADA3
MYBL2
ZKSCAN1
ETV4
MAX
SUPT4H1
RELB
RUNX1T1
ZSCAN5A
ELF1
NFX1
ARNT
E2F1
NOLC1
SLC2A4RG
MNX1
STAT5B
POU2F1
ZNF45
NKX2-5
PHF1
SOX12
NFATC1
FBXW7
TFDP3
NR4A3
DMTF1
HEY2
MTA1
TAF10
CSDA
PRRX2
ZBTB48
DRAP1
GTF2IRD1
SREBF2
TSC22D2
ECSIT
ZNF268
NR2F6
SCMH1
STAT4
PBX2
NFYB
KDM5A
STAT2
MYNN
BACH1
SOX5
ZKSCAN5
MTA2
ATF2
TFAM
AFF4
ZSCAN16
HOXD9
TAF5
CREB1
IRF8
BATF
FOXC1
TCEAL1
TAF4
FOXJ3
ZNF135
KLF12
CLOCK
ZNF175
LASS6
NFATC3
ADNP2
ATF6
ZBTB25
BCL11B
ZNF33B
REL
BLZF1
BUD31
TCF25
ZEB2
NFE2L1
TAF1B
NCOR1
MGA
MNT
GABPA
PTTG1
CREB3
RBPJ
PA2G4
RELA
HOXA4
SMAD2
MYCL1
ZNF281
HMG20A
ETV6
SCAND1
TULP4
TAF4B
SMAD5
RFX5
MAF
BTAF1
E2F3
ESRRA
PRDM2
GTF2H4
ZNF131
AHCTF1
NR0B1
ADNP
CNOT7
BNC1
ZNF24
ESRRG
MAFG
ZNF394
KLF3
ZNF500
NR1H3
TFE3
ZNF187
ELK4
NPAT
TAF7
MLX
MEF2A
TCF20
HIF1A
ZNF193
SUPT6H
SIM1
ZBTB17
YEATS4
ERF
ZSCAN12
ERG
ZFP37
PFDN1
RCOR1
NR1H4
TFAP2B
HIRA
TAF13
CREBBP
HR
MSL3
EDF1
BARX1
HOXB3
ZNF236
ZGPAT
TCF7
MTF1
FOXK2
E4F1
TAF6
YY1
ARID4A
ZHX3
CITED1
CBFA2T3
ZNF434
IRF5
IRF2
NFE2L2
IRF3
SCML2
ZNF35
ATF1
HDAC1
ZNF202
RNF4
ZNF155
ZNF134
GATAD2A
NR2C2
ZNF263
AATF
DLX4
ZNF444
SRF
UBN1
ZNF174
LASS2
REXO4
FOXJ2
TFEC
SPDEF
GAS7
HSF1