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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE25065_top500tf

DescriptionValidation cohort for genomic predictor of response and survival following neoadjuvant taxane-anthracycline chemotherapy in breast cancer
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE25065 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

TFAP2B
ELF5
FOS
SOX11
MEOX2
PITX1
ZIC1
ZNF165
PGR
GATA3
TBX3
SPDEF
PBX1
ESR1
NFIB
NR2F1
TCF4
SLC26A3
HOXB6
ASCL1
POU1F1
SOX10
NR4A2
EN1
ETV1
PAX3
RUNX1T1
NFE2
NR2F2
TBX1
HOXB2
PITX2
DLX2
ZNF135
SNAPC5
TP53
GSC2
TAF13
MAX
KLF9
ZEB1
MMP14
ARNT2
PLAG1
NPAS2
SATB2
GATA6
TCF7L2
POU2F3
MSX2
JUND
MAF
IRX4
SCML1
ZNF167
MEF2C
SIX3
PPARG
TRIM29
AEBP1
IRF4
HOXA9
IKZF1
WT1
NR3C1
MYCN
SUPT6H
ZNF157
HOXA10
FOXA1
CITED1
MXD1
E2F5
ZNF80
NFAT5
PTH
ZNF236
MECOM
BLZF1
NFYA
SIX1
HLF
JUN
CREM
WNT5A
NR0B1
LEF1
FOXN3
NR5A2
SMAD6
BHLHE41
MLLT10
ZFP36L2
MYF5
KLF6
POU4F3
FOXD1
MSC
ZNF41
ZNF287
KDM5B
HINFP
STAT1
MYBL2
SOX30
FOXM1
CREB3L1
ST18
PKNOX1
FOSB
EPAS1
HEY2
ZNF45
FOXE1
TADA3
LHX2
AHR
SNAI2
ZNF444
TBX19
ESRRG
HEY1
TAF12
TCF21
XBP1
RARB
NR2F6
VTN
ZNF238
KLF4
MNX1
GABPB1
CREB5
ZBTB48
RUNX3
ZXDC
SMAD1
ZFP37
ZFHX3
NFIX
ZNF155
NFX1
ETV2
TSC22D2
TFAP2C
POU3F2
PDX1
SIM1
SPI1
RB1
EHF
NR3C2
RXRA
ZNF81
DMRT1
HOXA7
SALL1
MYC
EGR4
FOSL1
C2orf3
ZNF639
CREBZF
NFKB2
TCF3
NPAS1
TAL1
TBX6
ARNTL2
CUX2
ZNF643
KLF12
FOSL2
FOXC2
TEF
HOXC13
ZEB2
NFATC4
TWIST1
FOXH1
TBX5
SP1
HOXD3
TFEB
AR
MAFB
SRY
TCF12
SOX2
SCAND2
PPARA
NEUROD1
TLX3
ECSIT
ZGPAT
RERE
PPARD
GATA4
THRA
GBX2
HOXB9
ELK4
ERG
RARA
POU4F1
OVOL1
NFATC1
RFXAP
E2F8
MYT1L
ELF4
MGA
ZSCAN18
NR4A1
PRDM2
HOXD1
PLSCR1
ZFP36L1
C11orf9
CDKN2A
GAS7
STRN3
NKX2-5
NR6A1
ZNF75D
BRD8
PAX6
EGR2
GATA2
NFYB
TRIM22
ZNF3
ZNF446
ZNF154
FOXO4
ARNTL
MZF1
LZTS1
E2F6
RCAN1
RUNX1
ZNF174
MAFK
FLI1
SCRT1
FOXG1
POU6F1
E2F3
ESR2
HNF4G
HOXB7
TAF1B
ELK1
ARNT
NFYC
TCF15
EN2
FOXI1
SOX18
SMAD3
REXO4
IKZF3
TBX10
IRX5
CSDA
HNF1A
HMGA1
PHF1
MEOX1
TLX2
TSC22D3
TP63
HOXA2
TBX2
LMO4
ONECUT1
RARG
ERF
MAFF
GABPA
HESX1
MSX1
REST
HOPX
ETV4
NFATC3
PEG3
ATF6
BHLHE40
FOXC1
MYF6
GCM1
MYT1
PAX8
ETV5
HOXC10
BARX1
PHTF1
MSRB2
ASCL2
HOXC8
MLL
ZFPM2
LHX1
SOX4
CBFA2T2
TFDP2
ZIC3
VDR
HOXA3
HNF1B
ATF1
NR2C1
NEUROG1
TRIM25
ELK3
TEAD4
PPBPL2
POU3F3
ELF1
NR1H4
FOXJ1
CSRNP3
MLXIPL
HMG20B
ZNF134
RUNX2
SIM2
TADA2A
MEF2D
SOX9
TFEC
NFE2L1
HSF1
BNC1
HOXB1
NKX2-1
ELF2
ZHX3
POU3F1
ATF5
POU5F1B
DBP
E2F4
E2F2
NR5A1
PRDM1
HSF2
EGR1
ISL1
KLF5
PHOX2A
DLX6
TFAM
FOXD2
NPAT
NRL
LHX6
SOX13
FOXL2
HIF1A
GLI2
HNF4A
ATOH1
FOXP3
ESRRB
ESRRA
TFCP2
FOXA2
CREBBP
E2F1
CEBPE
TRPS1
PAX4
SATB1
TFE3
POU6F2
ZNF83
CTBP1
CITED2
FOXO1
MEF2A
YY1
FOXB1
BATF3
ALX3
STAT2
TCF7
SREBF1
ADNP2
HOXB3
HOXA5
TCFL5
PROX1
HOXD11
ZNF217
HOXD13
YEATS4
STAT3
SPIB
TEAD3
ZNF91
HIF3A
SP140
FOXD3
TSHZ2
PAX5
MBD1
BCL3
ARID3A
SOX21
PBX2
ETS2
NKX3-2
NANOG
SNAPC4
NR4A3
NR1I2
POU2F2
CNOT8
TFAP2A
FOXO3
ZNF187
TAF5
OLIG2
USF2
SOX5
HOXA11
HES1
CEBPD
PHOX2B
EMX1
ZNF117
NKX2-8
ETS1
SOX17
MTA2
ZNF175
PRRX2
ZNF219
RELB
POU3F4
NKX3-1
ONECUT2
TFDP3
PKNOX2
RXRB
T
FOXF1
MYCL1
ZNF24
CBFB
MYOD1
ZNF132
ZSCAN12
ZNF500
ZNF140
CUX1
ATF2
HSF4
HIC1
DMTF1
ZNF277
NR2E3
SRF
HCLS1
NFIC
VSX1
CBL
KLF1
ATF6B
NR2C2
HDAC2
STAT6
ZKSCAN5
GTF2I
SMAD5
RBPJL
GTF2H3
ZNF202
LHX5
HOXB8
HAND1
ZKSCAN4
KLF11
KLF15
BCL6
HMGB2
ENO1
TBR1
HOXA4
IRF5
HMX1
HIRA
NOTCH1
TBX4
E4F1
ZKSCAN1
FOXE3
IRF2