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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE23177_top500tf

DescriptionPrediction of lymph node involvement in breast cancer from primary tumor tissue using gene expression profiling and miRNAs.
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE23177 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

PGR
EHF
ZNF238
PEG3
HOXC10
SIX1
HOXB6
SOX9
NR4A2
MSX2
ARNT2
HOXB3
TBX3
E2F8
MLLT10
BCL11B
HOXB2
NR2F1
MEOX2
MMP14
NKX3-1
FOS
EGR3
RORC
STAT1
FOXC1
NFIX
SCML1
SLC2A4RG
WNT5A
HOXA9
CEBPD
TWIST1
KLF5
HOXB7
ESR1
HEY2
NFIB
CSRNP3
EOMES
IRX1
TCF7L1
SREBF1
FOXQ1
SATB2
SATB1
ZFP36L2
NR2F2
MYC
RCAN1
FOXM1
THRB
NPAS2
TP63
NFE2L3
ATF3
PBX3
EGR1
CBFA2T3
GATA6
E2F7
AEBP1
HOXC9
MEOX1
BTG2
ZSCAN18
TEAD2
EGR2
TWIST2
SIX4
HOXA3
NFIL3
NFAT5
PGBD1
GLI3
LMO4
CSDA
RUNX2
HOPX
LEF1
NR3C2
AR
TRPS1
CTBP1
GATA3
PBX1
ELF3
HDX
RUNX3
HHEX
GATAD2B
HOXD10
KLF4
MEIS1
HES1
ZNF323
CITED2
PRRX1
TFEC
E2F5
IRF6
ETV1
ZNF165
IKZF1
FOXA1
ZNF117
SOX4
TAF4B
ZNF92
HEY1
ZNF397
GTF2H2
IRF7
TCF7L2
NFIA
TFAP2A
PTTG1
TFDP1
GATA2
TCEAL1
TRERF1
IRF5
JUN
BCL6
SOX13
PPARG
HOXB5
IRX3
ZFHX4
MYCL1
HOXA7
TP53
IRF9
ZNF93
MTA1
HOXC4
UHRF1
TFAP2C
ZNF396
ZFP36L1
TRIM22
SPDEF
ATF6B
ETV7
NR2C1
DLX4
NANOGNB
ZNF192
FOSL2
ELK4
RFX3
ZRANB2
ZFP37
CCRN4L
BHLHE41
PLSCR1
ZNF268
E2F3
MEIS3P1
RUNX1
ZNF639
BACH2
IRX5
HOXD8
PURA
TSHZ2
AFF4
ZFPM2
JUNB
ZNF367
CDKN2A
HOXB9
HMBOX1
CREB5
MAFF
FOXO6
LASS6
KLF9
MXD1
SNAI2
TGIF1
HMGA1
HSF1
FOXO3
ATF6
RARA
RUNX1T1
MITF
ZNF643
ZNF167
ZNF207
ZNF33A
VDR
PURB
CREB3L4
ZNF91
HCLS1
NR3C1
GLIS2
NFATC4
TEAD4
KLF2
PPARA
IRF1
BHLHE40
SMAD9
SLC30A9
SMAD3
PHF5A
NFIC
TCF4
ETS1
SUPT6H
CTNNB1
FLI1
VAV1
AHR
FOXO1
NFATC1
TSC22D3
HOXA2
CEBPA
PRDM1
ZKSCAN1
ZEB1
MEIS2
ZNF85
MLL
TGIF2
TFDP2
SALL2
MGA
FOXK2
NR2F6
ZNF134
ZNF140
NR1H3
GAS7
TULP4
ECSIT
EBF1
OVOL1
ATF7
DBP
TRIM25
MSX1
CEBPB
NR1D2
MAF
BLZF1
ZNF217
HIF1A
FOXF2
ZNF175
FOXC2
ZNF18
TAF5L
EPAS1
SOX12
ETV5
TCF19
PKNOX2
SOX7
GABPB1
TSHZ3
RB1
KDM5B
ZSCAN12
STAT5B
TFCP2
MSRB2
CUX1
IRF8
ZFHX3
RBCK1
MAFB
ZNF256
JDP2
MECOM
ZNF193
PBX2
ZNF37A
FOXN3
NFKB2
KLF7
ZNF24
GRHL2
ZHX1
ZNF83
TCF3
NCOR1
ZEB2
HMGB1
NFYA
REL
SOX18
MZF1
TEAD1
CREB3L2
CNOT7
ZNF213
TAL1
LHX6
YEATS4
ZNF232
NFE2L2
BCL3
JUND
SUPT4H1
TSHZ1
RORA
TCF7
E2F1
HMGB2
POU6F1
ATF5
GTF2H4
DDIT3
TAF1B
KLF12
TP73
ETV3
NFATC3
PHTF1
STAT6
ZSCAN16
ZNF197
MESP2
HSF2
MEF2A
ZNF496
SOX17
CBFB
TCFL5
TCF12
FOXS1
SMAD2
ZHX2
CREBZF
UBN1
SMAD6
AATF
SRF
ETS2
RXRA
ZNF281
CBFA2T2
SIX5
HEYL
LCOR
SCAND1
GATAD2A
ZSCAN5A
ZNF274
SMAD4
C5orf41
TAF7
ZHX3
ELF1
KLF6
HDAC2
NFE2L1
FOXN2
FOXP1
ETV6
FOXK1
MEF2C
FOXO4
ZNF187
MAFG
ZNF41
TADA2A
STAT3
TEAD3
ZSCAN2
HMG20B
LASS2
ERF
SOLH
ZNF133
FOXP4
RFX5
SREBF2
ENO1
TFEB
ERG
ARNTL
RERE
ELF4
ZNF131
NOTCH1
ARNT
ZGPAT
BACH1
TAF12
NOLC1
C1orf85
MAX
ZBTB38
PCGF2
CSRNP1
HOMEZ
CSRNP2
ZNF434
ZKSCAN4
XBP1
KLF10
TCF25
ZNF45
ZNF236
ZC3H8
SNAPC2
C2orf3
ELK1
SMAD1
MLX
NFX1
CREM
PPARD
MSL3
ZNF169
YY1
AHCTF1
GCFC1
ZBTB25
RFXANK
ZNF70
SP3
ZNF174
NFYB
FOXJ3
ALS2CR8
STAT2
KLF11
TAF4
E4F1
PFDN1
SP4
CNOT8
ZKSCAN3
TSC22D4
SCMH1
TFAM
SMAD5
ZNF138
FUBP1
NFXL1
CBL
ADNP2
ZNF263
PLAGL2
GTF2I
TAF5
ZNF277
ZNF500
TARDBP
TEF
PRDM2
ZNF33B
ZBTB48
ZNF148
KLF3
SPEN
NPAT
TSC22D1
KDM5A
FBXW7
LZTS1
GATAD1
ZXDC
DRAP1
YBX1
ZNF438
ELF2
HDAC1
ZSCAN29
RFXAP
UBP1
SIN3A
MBD1
ZNF202
MNT
RELA
ARID3A
ZNF75D
GTF2IRD1
MTF1
ZNF3
CREBL2
SOX6
SP1
PKNOX1
PA2G4
CREB3
TCF20
ZXDA
ZNF19
NFYC
ZFP90
POU2F1