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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE18864_top500tf

DescriptionTumor expression data from neoadjuvant trial of cisplatin monotherapy in triple negative breast cancer patients
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE18864 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

ESR1
GATA3
PEG3
FOXC1
TFAP2B
ELF5
ZIC1
PGR
CDKN2A
EHF
ANKRD30A
HOXA9
HOXB3
SIX1
SIX3
NFIB
ZNF238
IRX1
EGR1
EBF1
PTTG1
EGR3
PRRX1
IKZF1
ZEB1
HMGB2
EPAS1
IRX2
LMO4
IRF1
BHLHE41
ZNF91
NFE2L3
SOX10
ZNF367
XBP1
FOXP1
THRB
CEBPB
NR2F1
ESRRG
TCEAL1
PLSCR1
AFF4
RCAN1
TBX3
RB1
CREB3L4
GATA6
STAT1
TCF4
SPDEF
SOX6
ETS1
HOXB2
HOXD8
KLF4
NR2F2
SOX8
BCL6
FOXA1
TRIM22
LHX8
JUN
MAFF
SLC26A3
HEY1
CSDA
ATF3
CREBBP
TFDP1
HEY2
TCF12
HOPX
KLF5
GLIS2
LASS6
TRPS1
RUNX2
UHRF1
AEBP1
E2F8
SOX11
BTG2
AHCTF1
FOXO6
RORC
TSHZ2
ELF3
NR3C1
MAFB
SOX4
ZNF207
CITED1
SCML1
TWIST1
NFIL3
TFEC
YBX1
ZFP36L2
SP3
CEBPD
ZNF83
HES1
NR4A2
ZFP42
ARNT2
RORA
SOX2
MYC
MYNN
TAF4B
KLF6
CREB3L2
PPARD
DLX1
RUNX3
SMAD5
ADNP
CBFA2T2
AFF1
NFIA
PURA
TAF4
MYCN
ZNF217
HIF1A
ZNF117
FOXN2
CREBL2
HMGB1
GATAD2A
E2F7
IRF6
BHLHE40
PCGF2
RUNX1
ZNF165
TCF7L2
ZNF148
CNOT7
FOXG1
E2F3
SUPT4H1
KLF10
ELF4
HOXA2
SATB1
TRIM29
MKX
MEF2D
TSHZ1
SOX7
AHR
NFYA
MLLT10
TAF10
MEF2A
PBX1
ZRANB2
BRD8
PPARA
EGR2
ZIC2
SPEN
MAF
FOS
TAF7
PAX6
LCOR
NFIC
ETV5
TFAP2A
ZNF639
NFATC2
NFX1
HMGA1
SMAD9
MEIS3P1
TCF3
ZEB2
TFEB
IRX4
IRF8
ZNF33B
STAT3
NFAT5
TCFL5
EDF1
CUX1
ARX
HOXA10
HDAC1
MITF
AR
VDR
KDM5B
ZNF397
HDAC2
DLX6
CNBP
GCFC1
ZNF277
NR4A3
ZNF281
TFDP2
ARNTL2
HMBOX1
IRX3
HIRA
FUBP1
ETV6
GATA2
TAF5
TFAP2C
TULP4
WNT5A
C5orf41
ATF1
SMAD1
MSRB2
CTNNB1
ELK3
HOXD4
TSHZ3
BTAF1
ZFP36L1
NKX3-1
CNOT8
PURB
MXD1
ZSCAN16
SNAI2
ATF2
TSC22D3
NFE2L2
LASS2
SMAD6
FOXM1
CREM
NANOG
EOMES
ZNF131
FOXK2
DMTF1
SOX9
FOXO3
EN1
FOXO1
TFCP2L1
KLF3
C1orf85
MBD1
MEIS2
UBP1
ZFHX3
ZNF24
RFX5
CREB1
HOXC9
ZFPM2
ZHX1
SNAPC5
ZNF33A
MEF2C
GAS7
ENO1
TARDBP
ZBTB38
LEF1
ZNF232
NOLC1
PBX3
KDM5A
NFXL1
TSC22D1
ZNF92
DLX2
SIX4
TCF25
YY1
CREB5
STAT2
ETS2
HOXB8
OVOL1
SREBF1
SMAD2
MLX
NFYB
RCOR1
CBFB
SLC30A9
KLF12
KLF9
PRDM1
ESX1
HR
NCOR1
ZNF274
KLF2
MAFG
GTF2H3
SP4
HES6
SIN3A
TFAM
ATF7
CBL
HNRNPK
MNT
ZKSCAN1
C2orf3
TBX5
NFE2L1
SMAD4
CREBZF
SLC2A4RG
BUD31
ZNF37A
WT1
MZF1
IRX5
MSX1
SIM1
FOSB
ZHX2
GLI3
POU4F1
FOXP2
HOXB7
ASCL2
FOXN3
BLZF1
SHOX
KLF11
RNF4
BACH1
NPAT
TFE3
E2F6
MGA
LHX1
PRDM2
JUND
MTA1
ZSCAN2
PLAGL2
IRF7
ZNF93
ZFP90
GATAD2B
NR2C2
STAT6
RERE
ZNF135
HOXB6
FOSL2
PHF1
HCLS1
NR2F6
RBCK1
ELF2
RXRA
HOXC10
MLL
NR3C2
TRERF1
TCF19
MSX2
FOXJ3
ATF4
GTF2IRD1
FBXW7
SCML2
MEIS1
HNRNPAB
MAX
HOXC4
HNF1B
ZNF449
HLF
SALL2
ZNF85
NR2C1
ZNF213
RELA
CREB3L1
PLAG1
E2F4
KLF7
SOX17
HOXA5
ARID4A
ZNF496
ELF1
PRRX2
ZNF45
GLIS3
YEATS4
IRF3
FOXK1
ZNF70
RBPJ
ZSCAN18
TEAD1
BCL11B
ZNF268
GRHL2
CREB3
ZNF394
DDIT3
HOXB4
TRIM25
ONECUT2
CSRNP3
ARNT
IRF5
POU5F1B
MNX1
REST
DMRT1
ZNF236
NFATC4
LHX6
ELK1
STAT4
ZNF167
ZNF75D
TCF7
HSF1
TSC22D2
ZNF138
PA2G4
GATAD1
ATF5
CSRNP2
HOXA11
ZNF500
ZNF174
USF2
ZNF444
MMP14
PHF5A
IRF9
ZGPAT
LHX2
E2F2
PAX7
NR1D2
MECOM
SREBF2
RFXAP
NOTCH1
NFATC1
HOXA7
ZNF193
HOXB5
TCF7L1
CTBP1
TBX6
TEAD4
FOXJ1
FLI1
GLI2
LASS5
ESRRA
SIX2
AATF
TGIF1
CSRNP1
NR1H3
SNAPC4
ZXDC
TAF6
PBX2
MEOX2
PAX8
SCAND1
SPIB
TAF5L
CLOCK
CTCF
HOXA1
NFIX
ZNF445
ARNTL
MTF1
HOXD9
ADNP2
MAFK
STAT5B
TBX19
ZNF323
SP140
BATF
TBP
ZNF446
E2F5
KLF16