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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE10890_top500tf

DescriptionmRNA Breast Cancer Cell Line Profiles
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE10890 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

ESR1
ETS1
EHF
FOXQ1
FOXA1
FOSL1
PGR
TBX2
GATA3
HOXC10
SNAI2
SPDEF
HMGA2
ZIC1
FOS
ZEB1
ZSCAN18
ZNF238
ETV1
MSX2
IRX2
MMP14
HOXB2
CDKN2A
CREB3L1
ETV5
WNT5A
MAFF
NFIA
HOXB7
TRPS1
FOXF2
MAFB
ASCL2
EGR3
SATB1
NFE2L3
HEY2
GRHL2
TBX3
IRF6
BTG2
CREB3L4
ELF5
CBFA2T3
SOX2
HOXA9
IRX5
ELF3
HOXB3
RUNX2
SCML1
SOX9
EGR1
BHLHE41
STAT6
FOXD1
TRIM29
TFAP2B
HOXA10
TFAP2C
RCAN1
TWIST1
PBX1
HOXA3
TCF4
WT1
NR3C1
LHX2
DLX2
NPAS2
TRERF1
PPARG
NR2F1
MECOM
NR2F2
DLX1
NR4A2
TFCP2
PEG3
HOXC13
HES1
PGBD1
TCF7L1
ELK3
ZNF175
EN1
SATB2
ETV4
ZNF207
SOX4
BHLHE40
ARNT2
TSC22D3
MITF
ATF3
TFAP2A
EPAS1
ZHX2
PITX1
LEF1
CEBPA
NKX3-1
ZIC2
MEIS2
MSX1
LASS6
NFIX
IRX4
HOXA5
TWIST2
SIX1
ZNF91
HOXB6
ZEB2
PAX6
ASCL1
RELB
THRB
PRRX1
TSC22D1
ARNTL2
RB1
PHTF1
HHEX
HOXA7
SOX11
PBX3
AR
MEIS1
XBP1
IRX3
MKX
GATA6
FOXC1
SMAD9
KLF9
KLF4
E2F7
SIM2
TP53
FOXO6
TRIM22
LMO4
TFDP1
HES6
HOXA1
FOXP1
TEAD2
CEBPD
GLIS3
C5orf41
HOXA2
KLF7
ANKRD30A
RUNX3
GATA2
IRF1
ZFP36L1
SMAD1
TP63
TAF12
CSDA
SIM1
FOSL2
ZNF117
SMAD3
SOX7
ONECUT2
ZNF174
NFIB
FOXO1
FOXN3
PLSCR1
ESRRG
TGIF1
PPARA
IRF9
ETS2
HOPX
SOX15
VDR
MEIS3P1
KLF5
BCL11B
CITED1
TFCP2L1
ZFP90
ARNTL
MYBL2
ZNF83
ZNF165
FOXC2
FOXA2
DBP
HR
GLI3
HMGA1
CTBP1
IRX1
MXD1
HOXC11
NR0B1
SALL2
RORC
FOSB
HOXC9
SOX10
TCF19
KLF12
HEY1
SIX2
HMBOX1
NR3C2
RARA
ZNF131
ZBTB38
FOXI1
GATAD2B
NFATC2
JDP2
JUN
TSHZ1
C12orf28
HOXB9
ELF1
IRF7
ETV6
SMAD4
AHR
EBF1
HOXC4
BNC1
ZNF323
BATF
BCL6
C1orf85
TBX1
ARNT
NFIL3
OVOL1
SOX6
E2F8
ZFP42
PROX1
PRRX2
KDM5B
SOX17
KLF6
GABPB1
ZNF138
NFAT5
NFATC3
MYCL1
RORA
MLLT10
E2F5
FOXM1
PRDM1
MEF2C
HOXA11
FOXG1
ZFPM2
MEF2A
SMAD6
GATA4
CITED2
AFF4
FOXA3
TEAD1
PITX2
JUNB
CNOT7
RXRA
NR4A1
ZNF75D
NR1D2
PCGF2
NFKB2
ATF6
ZNF71
ZFHX3
DLX4
CTNNB1
CUX1
MYCN
ELF4
REL
MSC
MBD1
TAF4B
STAT3
LHX9
ZNF256
ZNF367
DLX6
ZNF3
TCF12
MESP1
ZNF217
TULP4
NKX2-5
ZKSCAN1
RARG
MGA
CREBZF
STAT1
BCL3
ZNF85
SLC2A4RG
ZNF268
TGIF2
PAX8
IRF5
TFDP2
FOXO3
MYC
CBFA2T2
TEF
AHCTF1
MAF
SUPT6H
UHRF1
ZNF397
GATA5
CSRNP2
SREBF1
TAF5
ZFP37
ZNF18
SUPT4H1
ZNF45
ZNF134
TEAD4
PAX3
PHF1
GAS7
TFEB
ZFP36L2
POU2F3
FOXJ3
PLAG1
ARID3A
MTA3
SPEN
GRHL3
BATF3
ATF7
SOX13
ZNF70
ZFHX4
TAF13
BACH1
E2F6
RXRB
KLF3
RUNX1
MEIS3
ISL1
GLIS2
SIX4
DLX3
ZNF33B
RBPJ
MNX1
HLF
GATAD1
ZNF148
ISL2
LZTS1
CREB3L2
TCF7L2
ARID4A
TCF3
TCF7
HNF4G
FOXP2
NR2F6
ZSCAN5A
NFATC1
NFE2L2
ZNF274
TAL1
CREM
SIN3A
HOXB8
ZNF232
EGR2
EN2
POU2F2
SALL1
ZNF93
TCFL5
SCML2
MLL
CBFB
ZNF215
ENO1
ZNF187
HINFP
NFYA
POU4F1
PURB
HOXB13
MEF2D
C11orf9
ZNF213
UBN1
TAF1B
ZNF434
RERE
RFXAP
ZNF639
CREB5
TFE3
ZXDC
ZHX1
PBX2
NFIC
NR5A2
MAFG
KDM5A
FOXP4
L3MBTL4
POU3F2
NOTCH1
KLF11
DDIT3
E2F2
MSRB2
CREBL2
TCF25
C2orf3
THRA
CEBPB
PLAGL2
SOX8
NR1H3
ZNF140
HSF1
ATF2
SMAD2
ARX
PBX4
ATF5
TCEAL1
FOXE1
TSC22D2
STAT5B
PKNOX1
IRF2
ZFPM1
ZNF135
ZHX3
FOXK2
PTTG1
VAV1
HNF1B
TSC22D4
FOXL2
HMGB1
MSL3
OLIG2
JUND
CBL
ZSCAN2
ZNF24
KLF2
ZGPAT
MEOX1
TSHZ3
SCMH1
ZSCAN16
HOXB5
TFAM
CSRNP3
STRN3
LZTR1
MZF1
SLC30A9
E2F1
ZNF277
NKX2-1
HOXC12
ZNF92
PPARD
POU2F1
SP4
ZNF496
ZKSCAN4
PURA
FBXW7
TARDBP
HOXD1
ZC3H8
NFE2L1
HOXB4
SOX12
GTF2I
YY1