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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE9936_top500tf

DescriptionExpression data from human breast cancer cells (MCF-7) coexpressing ERalpha and Erbeta, treated with phytoestrogens
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE9936 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

ESR2
PTTG1
MYBL2
FOXM1
HMGB2
ASCL1
ATF3
RCAN1
PBX1
IRF6
HOXC4
MAFF
KLF6
KLF4
HOPX
AFF1
LMO4
EPAS1
FOS
KDM5B
JUN
CUX1
C11orf9
ZNF91
ELF1
ZNF217
BCL6
NFYB
SNAPC5
HMG20B
TSC22D2
TBX2
TFAP2A
RBPJ
SMAD2
SP3
ZNF238
SOX4
YY1
ZNF131
ARNT2
PURA
ZNF140
TRPS1
DLX2
UBN1
HOXC10
TFAM
SATB1
RXRA
NKX3-1
CREB1
MAX
KLF10
ZNF3
MYC
ELF5
ZNF24
MLL
ZNF444
IRX5
CREB3L1
FOSL2
CITED2
VDR
PHTF1
NFIB
GATA3
ZNF434
MBD1
ESRRA
NOLC1
CREB3L2
ZNF274
TCF7L2
AEBP1
RARA
SMAD3
PLSCR1
BATF
E2F6
ELK1
BTG2
CITED1
RERE
GABPB1
GLI3
MECOM
GTF2IRD1
CREBBP
FOXO4
CSRNP2
CNOT8
SOX9
PBX3
NR2F2
ZNF148
HOXB3
MSX1
ATF1
TFEB
ESR1
EVX1
BLZF1
PITX3
NFYA
UBP1
MEF2D
EGR3
TCF4
TCF3
PGR
FOXO3
SMAD6
ZNF263
STAT6
PBX2
XBP1
HOXC5
NR2C1
HOXB7
SCML1
PCGF2
SMAD1
CBFA2T3
NFATC1
IRF9
ZFP36L1
STAT1
CREBZF
MEIS3P1
ZXDC
SPDEF
HMGB1
BCL3
ZBTB17
ADNP
GTF2I
CEBPE
TBX10
TFAP2C
CEBPA
SRF
TGIF2
TCFL5
HOXC11
HMBOX1
STAT3
HIRA
MSX2
TCF12
MLX
MEF2A
USF2
BRD8
IRF3
CBFB
NFKB1
HMGA1
GCFC1
SUPT6H
NFIL3
BHLHE41
KLF5
EGR4
ELF2
AHR
TGIF1
NPAS1
NR2F6
ETV7
NFE2L2
ZNF394
ZNF202
CEBPD
KDM5A
CTCF
ZNF83
FOXO1
CREBL2
YEATS4
NOTCH1
GATAD1
JUND
TCF20
TFDP2
ZNF80
ATF5
AATF
PRRX2
HES1
POU6F1
ZKSCAN1
ERF
ZNF117
ZFP36L2
HMX1
TP53
RCOR1
SOX13
ZNF281
FOXJ3
CTBP1
HOXC8
MAFB
SNAPC4
BARX1
TSC22D3
MYNN
ZHX2
SOLH
PFDN1
RUNX1
GRHL2
MTA1
IKZF1
STRN3
RFX5
GATA2
ZNF287
ETS2
ELF3
HIF1A
SREBF2
HOXC13
TAF6
MLXIPL
ZNF207
AR
MTF1
MGA
MSL3
TSC22D1
TSC22D4
TBX3
CEBPB
NFIC
FOXK2
TFE3
TEAD4
GATAD2A
SLC2A4RG
TAF7
TAF12
PITX1
RFXANK
BHLHE40
ZNF93
NFATC3
PPARA
ZNF219
E2F5
PRDM2
SPEN
SREBF1
FOXP3
TCF25
TAF13
PITX2
HINFP
HHEX
ZNF134
BCL11B
NCOR1
TEAD3
SATB2
RELB
TWIST1
ECSIT
PA2G4
KLF9
SUPT4H1
MYCN
ZNF232
BTAF1
CSDA
WT1
RBCK1
DMTF1
CREB3
E4F1
CTNNB1
FUBP1
MAF
NFE2L1
NR4A1
ZHX3
ZNF236
LZTR1
ATF6
TFDP1
RARG
CREM
TARDBP
SMAD5
POU2F2
E2F1
LASS6
CDKN2A
ZNF45
MNX1
POU1F1
MNT
FOXC1
AHCTF1
NFATC4
TAF5
REL
GAS7
ARID4A
PKNOX1
RELA
HMG20A
TAF10
MEOX2
ENO1
JUNB
TAF1B
E2F3
DDIT3
HDAC2
ELK3
MZF1
ZNF277
SCML2
ELF4
DRAP1
ZGPAT
HCFC1
PHF1
HNRNPAB
FOXD1
NR2F1
MSRB2
FOXA1
TRIM28
CBFA2T2
CLOCK
ZNF33B
CNBP
LZTS1
TFAP4
FOXI1
REST
ADNP2
ZNF35
HNF4A
TCEAL1
ETV2
ATF2
LASS2
NFYC
TBX1
SOX15
ZNF639
HSF2
ZNF85
ZBTB38
ZFHX3
FOXN3
HOXA9
C2orf3
FOXJ1
NR1H2
ARNTL2
POU2F3
ZNF75D
GABPA
IRF5
SCAND1
PHOX2A
POU5F1B
GATA6
TADA3
LEF1
HOXB6
MAFG
ZSCAN18
GTF2H3
ZKSCAN5
STAT4
ZNF155
ZNF268
SLC30A9
BACH1
POU3F2
ATF6B
CNOT7
ZSCAN2
NFKB2
ZNF174
TAF4
ZEB2
TCF15
SIX3
RXRB
ATF4
PPARD
RB1
TRIM25
EMX1
HNF1A
GTF2H4
HDAC1
RNF4
SOX12
HEY1
YBX1
NR5A2
TCF7
BUD31
HSF1
MYT1
EDF1
HNRNPK
TFAP2B
ZSCAN16
NR2E3
MAFK
FOXJ2
TULP4
MYF5
ZNF500
ONECUT2
FBXW7
GBX1
KLF3
POU4F1
TAF5L
IRX4
ZKSCAN4
NKX2-8
TP63
PAX8
DBP
ELK4
ETV5
HOXB5
CIR1
SOX10
NKX2-1
ZSCAN12
NEUROD2
NKX2-5
MTA2
NFX1
MMP14
ARNT
PAX5
PRDM1
PLAGL2
SCMH1
TBX5
ZEB1
KLF12
TBX6
THRA
NR4A2
KLF11
HEYL
TBX4
E2F4
E2F2
HOXD13
SCAND2
NR2C2
NRL
NPAS2
IRF7
HOXD9
ZNF81
NFE2L3
ZNF189
RUNX1T1
ETV4
MITF
AFF4
ETV1
HOXA6
HSF4
WNT5A
ZNF193
E2F8
KLF7
ARNTL
TRIM29
VAX2
ZFP37
LHX3
NR0B1
NR4A3
OLIG2
REXO4
SIM1
FOXA2
STAT5B
GLI2
SNAI2
STAT2
DLX6