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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE4823_top500tf

DescriptionComparison of normal breast epithelium and stroma from reduction and I.D.C. cases
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE4823 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

SIX3
HOXA4
MSX2
NR1H4
RB1
STAT4
HINFP
MTA1
HDAC1
SMAD3
PPARG
PHOX2B
FOXC1
ELF4
TSC22D2
PPARA
HOXA5
LHX9
RBPJ
KLF12
MLLT10
ESR1
C1orf85
MEIS2
AHCTF1
SOLH
PITX1
CREB3L3
ZNF496
SMAD6
KLF5
SOX6
ZNF217
IKZF3
MESP1
TP53
CREB3L2
SMAD4
LASS2
TFEC
HIF1A
STAT2
ETV1
NR1I3
MMP14
FOXA1
AR
VDR
TGIF2LY
NFYB
HIF3A
SMAD2
ZNF236
CDKN2A
ADNP2
STRN3
SCAND3
SPEN
ETV6
TSHZ3
HES5
TCF7L2
PA2G4
FOXQ1
TCF4
STAT1
PPARD
RUNX2
ZEB2
CNBP
ZNF165
FEV
OTX1
E4F1
RORA
FOXP4
THRB
ZNF133
THRA
ARNTL2
OVOL1
VAX2
TWIST1
NKX2-3
ZNF24
HES1
FOXK2
STAT5B
NANOGP1
ZRANB2
TCF7
ATF7
JUN
FOXO4
NFIB
TFAP2B
TSC22D4
C2orf3
ZGPAT
POU5F1
AFF4
NFE2L2
RFX1
ZNF33A
FOXA2
BARHL2
ERG
BTAF1
SIN3A
NOTCH1
RERE
NR1D2
ZNF75D
RELB
EMX1
PKNOX1
POU1F1
CITED2
TBX5
BCL11B
MYF6
TARDBP
FOXH1
HOXB7
KLF6
MEIS3
TRIM29
SIM2
E2F7
MYC
HOXB4
ZNF174
ZKSCAN1
ZFHX4
DLX3
CTNNB1
CREM
GSC2
ESRRG
UBN1
NPAT
LMO4
IRX4
TFAP2A
ETV3L
IRF2
TBX3
SOX13
ZSCAN18
CBL
RUNX3
DLX2
DLX6
POU2F3
IRF7
RCOR1
TGIF2
GLIS3
MZF1
FOXP3
HMGA2
TP63
LZTR1
PHF5A
SREBF2
SCML1
TBX2
MECOM
GABPB1
HMGA1
ZNF90
CTCF
TEF
SCML2
ZIC5
ZNF37A
ZIC1
SP1
GTF2I
NR3C1
MSX1
HNF1A
CDX2
ZKSCAN5
SOX30
ESR2
IKZF4
KLF11
SHOX
HOXB3
ZNF483
ALS2CR8
PURB
ZNF93
MLXIPL
HEY2
MITF
HOXB2
ASCL2
NEUROD1
CEBPB
ESRRA
SLC2A4RG
ZXDC
GCFC1
TEAD3
KLF4
ZNF187
MSL3
ELK4
E2F1
NKX6-2
NFKB1
CBFA2T3
TBP
ZBTB48
TP73
ZSCAN16
TBR1
ATF2
FOXL1
ZFP36L1
DBP
ZNF197
GATAD2A
STAT6
ZBTB25
SNAI3
EVX1
HMGB1
NR2E1
KLF3
ZKSCAN4
MGA
GCM1
POU2F1
TCFL5
JUNB
POU4F3
AFF1
SRF
HOXC11
POU3F4
ARX
HNF4G
ERF
TRPS1
XBP1
BLZF1
IRF5
ZNF135
ZNF202
SIX1
RCAN1
NR2F2
MTA3
ELF1
NFYA
TAF4B
MAFK
ZHX3
HOXA1
ZXDA
SOX11
EGR3
NR2E3
SP3
HOXC9
ZNF45
HOXA13
IRX5
SIX4
TAF13
NFIX
MAF
KDM5B
NR2F1
FOXM1
NKX2-1
ZNF281
RFX5
STAT3
PRDM2
TFAM
NME2
E2F4
HNRNPK
NFAT5
SOX10
SNAI2
CUX2
PLAGL2
KLF15
MXD1
IRX6
SOX4
HCFC1
ST18
TFE3
FOXP2
MBD1
IKZF1
MYCL1
NFX1
CSDA
POU6F1
ZNF167
GATA1
ECSIT
CTBP1
CBFB
GBX1
ATF4
ZNF274
NFYC
GAS7
LHX4
SMAD5
HOXD1
IRX1
GRHL2
PBX1
FOXD1
TFEB
UBP1
TAF1B
ELF5
FBXW7
GLIS2
PLSCR1
ATF3
ZSCAN21
ZNF434
NPAS1
HES6
DMTF1
EBF1
FOXJ2
POU3F1
ZBTB38
GTF2H4
ZNF445
ZNF238
FOXC2
TRIM22
VSX1
GATAD1
HESX1
MAFA
SP140
RFX3
KLF2
WT1
C12orf28
REXO4
FOXD4
MYCN
TCEAL1
LHX1
ZNF193
TSHZ1
FOXO1
ZEB1
NFIA
RELA
KLF10
HOXD4
ONECUT1
ZNF33B
ZSCAN5A
MNX1
HOPX
CEBPA
YEATS4
CREBBP
HOXC4
ELK1
EN1
HOXD11
RUNX1
HOXA10
DLX1
ZSCAN4
ZNF81
RORB
MSC
L3MBTL4
LHX6
TFAP2C
ZNF175
FOXN3
HIRA
PURA
POU2F2
SPDEF
ZNF19
BUD31
IRF3
TCF12
NR1H3
SOX7
ZNF263
ZNF215
AEBP1
NR1D1
MYOG
LCOR
MEF2D
TSHZ2
HMX2
CREB3L1
ZNF498
GTF2IRD1
TAF7
ZNF138
HOXC13
TAF5L
EGR2
ZSCAN1
E2F3
CREBL2
HNF1B
TBX19
FOXE1
ZNF131
TAL1
SUPT4H1
TFAP4
MTF1
SCAND1
NFATC1
UHRF1
BATF
SIM1
ZIC3
ASCL1
DDIT3
SALL1
TCF19
TEAD4
CSRNP1
CREB3
ETV5
MAFB
ZNF69
FOXN2
PBX4
NKX2-5
NR0B1
HDAC2
HSF5
ZSCAN2
ZNF367
RNF4
ZNF277
BTG2
KLF7
TLX1
PROX1
YY1
SOX17
TCF25
POU4F2
RUNX1T1
HOXA6
TRIM28
NFKB2
HOXB8
EPAS1
ELF2
FOSB
EGR1
SIX6
MSRB2
ZNF397
HOXD9
FOXJ3
RAX2
ETS2
TRERF1
ZNF213
ZNF134
IRF8
FOXL2
TBX10
SIX2
IRX2
SATB2
ETV7
MLL
SPI1
E2F5
BATF3
ATF6
SUPT6H
KCNH8
GABPA
PKNOX2
PAX5
LASS6