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TCNG: The Cancer Network Galaxy
Tcng

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE12622_top500tf

DescriptionTumor-associated stroma derived from primary clinical breast cancer samples (II)
Gene Set MethodTop 500 high variable transcription factor genes
Gene Set SourceGEO : GSE12622 (See on GEO)
Number of Nodes500

Network Nodes in the Gene Set

CREBBP
NCOR1
MIXL1
GSX1
TADA2A
NPAS2
TCF7
ARNTL
NR2F6
ETV3
ZC3H8
SP1
CTNNB1
AR
ZNF75D
SNAI2
KLF4
RXRA
SOX9
ELF5
NKX6-1
HNF4G
SPIB
PAX8
FOXE1
NFIB
SOX7
MBD1
FOSB
RNF4
CSRNP1
TSHZ2
POU1F1
SOX11
TBX15
MGA
CEBPB
PPARA
MLLT10
NOTCH1
TCF4
RERE
ATF2
KLF10
HINFP
TSHZ1
TCF25
KLF15
STAT1
KLF2
RB1
ZNF187
NANOGP1
SMAD2
STRN3
TCF7L2
HMGB1
FEV
RUNX3
LZTR1
HES5
CREB3L2
MYC
ZNF33A
GCFC1
CDKN2A
SMAD4
ZEB2
BARHL2
GRHL2
ADNP2
FOXP3
KLF11
OTX1
AEBP1
BLZF1
MYF6
HDAC1
ZHX3
NFYB
TBX22
DDIT3
TAF5L
IRX1
CSRNP2
ARNTL2
HOXA10
NR3C1
FOXN2
DLX2
ZNF434
TRPS1
MEIS3
NFKB1
RCOR1
SMAD3
RUNX1T1
STAT5B
AHCTF1
TAF7
RORA
STAT4
MZF1
TFAP2A
ELK1
HNF1A
KLF3
NKX2-1
ZNF496
FOXD1
RFX5
MECOM
NRL
SNAI3
VDR
BATF
MAFK
SCML1
RELA
OVOL1
PRDM2
RELB
HIF3A
ZNF274
GBX1
ZIC5
ZIC1
ZNF215
JUN
CREB3
PPARG
IKZF4
FBXW7
ZSCAN5A
CNBP
MSX2
PLAGL2
BTAF1
HMGA2
FOXM1
KLF12
PROX1
TFEB
FOXA1
NFKB2
HCFC1
EGR4
BUD31
GATA2
HOXD1
ZRANB2
TP63
UBP1
TBX21
DBP
ZSCAN29
PA2G4
TBP
TEF
IRX4
ZIC3
CREBZF
ELF2
POU2F2
TSC22D2
ZNF37A
CREB3L1
SP3
SHOX
SIM1
HOPX
CEBPA
ZBTB38
ZNF174
SMAD6
ZNF45
ZFHX4
NFIX
MSX1
HMX1
AFF4
PBX4
TFAP2B
HNF1B
ZNF138
SPDEF
MITF
SNAPC5
MAF
SCAND3
ZBTB48
ZIM2
SALL1
HOXD8
RHOXF2
LASS5
SIN3A
ZNF90
HIF1A
SPEN
MSC
PURB
IRF7
NR1I3
GAS7
E2F3
ZNF236
TBR1
ST18
PRRX2
SIX6
ERG
NR1D2
ZNF287
TFAM
RBPJ
NFX1
TRIM28
TP53
KLF5
MNT
GABPA
FOXJ1
ZXDC
ZXDA
TAL1
IKZF3
MLL
THRA
SOX18
RFX1
TP73
EMX1
ESR2
ETV3L
FOXP2
TBX3
PKNOX2
GTF2IRD1
POU3F4
ARNT
JUNB
TEAD3
MLX
CSDA
NR2F2
ZNF483
DLX6
MYOG
PBX2
NPAT
TGIF1
POU4F3
RFXANK
GCM1
SMAD9
AFF1
FOXQ1
TCF19
ZNF197
GTF2H4
ZKSCAN1
ZFHX2
PAX7
CEBPE
HESX1
NFIC
ZNF217
ETS2
IKZF1
SIM2
ZNF24
ZSCAN21
HIC1
FOXP4
USF1
ZNF639
ESRRG
SOLH
CBL
IRX3
POU2F1
MTA3
EVX1
FLI1
CSRNP3
ESRRB
HOXB1
ZNF281
HMX2
STAT3
TAF1B
ZNF18
HOXC11
ZNF446
HOXD3
TMEM229A
ARX
EN1
ZKSCAN3
E4F1
ELK4
MYT1L
HOXC9
LHX9
VAX2
NFE2L1
ZNF263
SOX12
MAFG
TBX5
TWIST1
SLC2A4RG
NFYC
FOXA2
HNRNPK
CTCF
POU5F2
MESP1
FOXI3
GRHL3
SOX10
ZFP36L1
POU2F3
ZNF135
ERF
NR1H2
TSC22D4
BCL11B
TFAP4
BATF2
GABPB1
FOXC2
ELF4
SCML2
SOX17
NR4A1
ZNF167
IRX2
SUPT4H1
ZNF445
ZBTB25
SOX4
SP140
E2F2
TRERF1
NKX2-3
ESRRA
SATB2
FOXK2
MEF2A
GATAD2A
ETV6
SMAD1
TFDP2
HOXA4
NEUROD1
UBN1
GTF2I
PGR
YY1
ZNF219
SRF
TCEAL1
ZNF93
TCF12
ZNF207
MTA1
FOXO4
TFCP2
C11orf9
GATA3
ESR1
ZNF85
EGR1
CREBL2
NFIA
RUNX1
ZNF323
TCFL5
CTBP1
NR1D1
ATF4
KCNH8
MAFB
DLX3
PHF5A
HOXA1
ZFP90
TRIM29
TLX2
HOXB2
SOX6
ZNF19
HMBOX1
MSL3
ZSCAN16
HOXA9
GLIS3
NOLC1
PURA
CUX2
HES1
ZNF91
SOX5
ELF1
ZNF238
ZNF397
ETV5
PBX1
MEIS2
MYCN
LHX4
NR4A2
SUPT6H
TCF7L1
THRB
RORB
PFDN1
FOXH1
BRD8
FOSL1
SCAND2
E2F1
ZNF213
TEAD4
CREB3L3
SATB1
ARID4A
EGR3
TAF13
SOX13
MLXIPL
HNF4A
IRF3
FOXC1
HES6
TFEC
PHOX2B
HOXB7
NFE2
IRF2
REXO4
FOS
MTF1
POU3F1
SOX2
SOX30
NEUROG1
NKX1-2
ELK3
DMTF1
GLI2
IRF5
PDX1
HIRA
TARDBP
GATAD1
HMGA1
LASS2
ZNF193
SCRT1
TRIM25
MEIS1
NR2F1
HOXC8
FOXD4
USF2
UHRF1
GSC
C2orf3
TULP4
LHX3
ZNF154
ZSCAN18
L3MBTL4
ZSCAN2
CNOT8
HOXB3
ZGPAT
CREM
PAX5
FOSL2
MEIS3P1
ZNF192
SIX3
TFDP1
WNT5A
HSF4
E2F5
HOXC10
FOXP1
FOXJ3
XBP1
GSX2
PLAG1
HSF5
HOXD4
C5orf41
WT1