Gene Set

GSE29598_top8000

Description	A Methodology for Utilization of Predictive Genomic Signatures in FFPE Samples
Gene Set Method	Top 8000 high variable genes
Gene Set Source	GEO : GSE29598 (See on GEO)
Number of Nodes	8000

Network Nodes in the Gene Set

KRT6C///KRT6B///KRT6A

MAGEA2B///MAGEA6///MAGEA3///MAGEA2

GAGE12F///GAGE2A///GAGE12G///GAGE2B///GAGE2E///GAGE12I///GAGE7///GAGE4///GAGE2C

GAGE12D///GAGE12F///GAGE2A///GAGE12H///GAGE12E///GAGE12B///GAGE12C///GAGE12G///GAGE2B///GAGE2E///GAGE12I///GAGE7///GAGE6///GAGE5///GAGE4///GAGE2C

GAGE8///GAGE12F///GAGE2A///GAGE2D///GAGE12J///GAGE12G///GAGE2B///GAGE2E///GAGE12I///GAGE7///GAGE6///GAGE5///GAGE4///GAGE3///GAGE2C///GAGE1

ANXA8L1///ANXA8///ANXA8L2

GAGE12D///GAGE8///GAGE12F///GAGE2A///GAGE12H///GAGE12E///GAGE12B///GAGE12C///GAGE2D///GAGE12J///GAGE12G///GAGE2B///GAGE2E///GAGE12I///GAGE7///GAGE6///GAGE5///GAGE4///GAGE2C///GAGE1

GAGE12F///GAGE2A///GAGE12J///GAGE12G///GAGE2B///GAGE2E///GAGE12I///GAGE7///GAGE6///GAGE5///GAGE4///GAGE2C///GAGE1

LST-3TM12///SLCO1B3///SLCO1B1

PRR5-ARHGAP8///PRR5///ARHGAP8

DAZ4///DAZ2///DAZ3///DAZ1

PCDHA1///PCDHA2///PCDHA3///PCDHA4///PCDHA5///PCDHA6///PCDHA7///PCDHA8///PCDHA10///PCDHA11///PCDHA12///PCDHA13///PCDHAC1///PCDHAC2///PCDHA9

SPANXB2///SPANXA2///SPANXB1///SPANXF1///SPANXC///SPANXA1

CALM3///CALM2///CALM1

AMY2B///AMY2A///AMY1C///AMY1B///AMY1A

LOC652694///IGK@///IGKC

UGT1A3///UGT1A1///UGT1A4///UGT1A9///UGT1A5///UGT1A6///UGT1A7///UGT1A8///UGT1A10

LOC728412///TSPY4///TSPY3///TSPY1

PCDHGA3///PCDHGA5///PCDHGA6///PCDHGA10///PCDHGA11///PCDHGA12

LOC100132942///TBCAP2///KAZ

HIST1H3F///HIST1H3B///HIST1H3H///HIST1H3J///HIST1H3G///HIST1H3I///HIST1H3E///HIST1H3C///HIST1H3D///HIST1H3A///HIST1H2AD

LOC100132832///LOC441259///PMS2L12///PMS2///PMS2L3///PMS2L5///PMS2L2///PMS2L1

IGHV4-31///IGHM///IGHG2///IGHG1///IGH@

LOC100288628///LOC727842

RRN3P1///RRN3P2///RRN3

HIST1H2BC///HIST1H2BI///HIST1H2BE///HIST1H2BF///HIST1H2BG

HIST1H2AH///HIST1H2AG///HIST1H2AM///HIST1H2AL///HIST1H2AJ///HIST1H2AK///HIST1H2AI

TRAJ17///TRAV20///TRD@///TRA@

CCL3L3///CCL3L1///CCL3

PLGLA///PLGLB1///PLGLB2

LOC652694///IGK@///IGKV1-5///IGKC

IGLV2-14///IGLC2///IGL@

MBL2

PDE6C

NUS1P2///NUS1///NUS1P3

SPANXB2///SPANXB1///SPANXF1

LOC100287328///RPS29P28

LOC100126583///LOC652494///IGHM///IGHG3///IGHG2///IGHG1///IGHA1///IGH@

PALM2-AKAP2///PALM2///AKAP2

LOC100133977///LOC728410///LOC653548///LOC653545///LOC653544///LOC653543///HPX-2///LOC652291///LOC652119///LOC651709///LOC440014///DUX1///DUX3///DUX5///DUX4///ASMTL

LOC100132247///NPIPL3

LOC440926///H3F3B///H3F3A

STON1-GTF2A1L///STON1///GTF2A1L

KCNJ18///LOC100131509///KCNJ12

LOC729602///LOC642799///NPIPL3

LOC100131795///NMNAT2

PION

LOC100288702///ACTR3P1///RPL4P1///TRA@///SALL2

LOC100126583///IGHV3OR16-13///IGHA2///IGHA1///IGH@

LOC100132015///ODZ1///SH2D1A

LOC391081///LOC128102///HSD3B2///HSD3B1

LOC723972///ANP32C///ANP32D///ANP32A

MT1P2///MT1M///MT1H///MT1E

HIST1H2AB///HIST1H2AE

LOC650293///UNC93B2///OR7E87P

TRAC///TRAJ17///TRAV20///TRD@///TRA@

UGT1A9///UGT1A6///UGT1A8

RPL7P12///RPL7P32///RPL7P24///RPL7P20///RPL7P26///RPL7P23///RPL7P58///RPL7P8///RPL7P48///RPL7

LOC100133772///SLC16A5

LOC730138///LOC391136///RPL4P3///VAMP4

IGHV4-31///IGHV@///IGHM///IGHG1///IGHD///IGHA1

TRAC///TRAJ17///TRAV20///TRA@

LOC729978///LOC729602///NPIPL1///PDXDC2

COG7

XAGE1B///XAGE1A///XAGE1E///XAGE1C///XAGE1D

LOC100133811///LOC100133661///LOC731718///ZNF749///RNASE2///HLA-DRB5///HLA-DRB4///HLA-DRB3///HLA-DRB2///HLA-DRB1

KIR2DS2///KIR3DP1///LOC727787///KIR2DL5B///KIR3DP1///KIR3DL3///KIR2DL5A///KIR3DL2///KIR3DL1///KIR2DS5///KIR2DS4///KIR2DS3///KIR2DS1///KIR2DL3///KIR2DL2///KIR2DL1

LOC652494///IGHV4-31///IGHM///IGHG3///IGHG2///IGHG1///IGHD///IGHA1

LOC100134209///IQSEC3

HIST2H4B///HIST4H4///HIST2H4A///HIST1H4L///HIST1H4E///HIST1H4B///HIST1H4H///HIST1H4C///HIST1H4J///HIST1H4K///HIST1H4F///HIST1H4D///HIST1H4A///HIST1H4I

LOC100133862///IGHG1///IGHA1

LOC100132941///LOC647224///IGHV3OR16-6

NBPF10///NBPF16///NBPF24///NBPF8///AE01///NBPF9///NBPF11///KIAA1245///NBPF1///NBPF14

GH2///GH1///CSHL1///CSH2///CSH1

TBC1D3H///TBC1D3///TBC1D3G///LOC653380///TBC1D3C///TBC1D3B///TBC1D3F

FAM75A5///FAM75A3///FAM75A1///FAM75A4///FAM75A2///FAM75A6///FAM75A7

C4orf10

KIR2DS2///KIR2DS4///KIR2DS1

LOC100133005///RASA4P///RASA4

LOC100133811///LOC100133661///ECRP///ZNF749///RNASE2///HLA-DRB5///HLA-DRB4///HLA-DRB3///HLA-DRB2///HLA-DRB1

LOC100128011///MIR622///KRT18P27

POLR2J3///POLR2J2///POLR2J4

IGLV2-11///IGLV2-18///IGLV2-23///IGLC1///IGL@

LOC100129013///SERBP1P1

NCRNA00271///GAPDHL19

LOC650293///UNC93B4///UNC93B2///LOC442381///OR7E125P///OR7E37P///OR7E87P

LOC100132247///LOC613037///NPIPL3

POU5F1P4///POU5F1P3///POU5F1B///POU5F1

LOC100132773///LOC100131868///LOC100129064///PPP4R2

LOC100134331///LOC652128///VSIG6///IGHM///IGHD

RPL29P11///RPL29P15///RPL29P9///RPL29P26///RPL29P6///RPL29P4///RPL29P31///RPL29P12///RPL29

LOC100289473///LOC441938///SIRPG

LOC100134331///LOC100126583///LOC652128///LOC642131///VSIG6///IGHV4-31///IGHM///IGHG4///IGHG3///IGHG1///IGHD///IGHA2///IGHA1///IGH@

UGT1A6///UGT1A7///UGT1A8///UGT1A10

FABP5L2///FABP5L7///FABP5

LOC440871///IGK@///IGKV3-20///IGKV3D-11///IGKV3D-15

LOC100133811///LOC100133661///ZNF749///RNASE2///HLA-DRB5///HLA-DRB4///HLA-DRB3///HLA-DRB2///HLA-DRB1

RPL5P1///RPL5P34///SNORA66///RPL5

LOC100132247///LOC730153///LOC729978///LOC729602///LOC642799///LOC641298///NPIPL1///NPIPL3

TOLLIP

OGDH

MYL5

LOC728410///LOC653548///LOC653545///LOC653544///LOC653543///DUX4

FAM153C///FAM153A///FAM153B

RBMY1J///RBMY1E///RBMY1D///RBMY1B///RBMY1F///RBMY3AP///RBMY1H///RBMY1A1

LOC730755///KAP2.1B///KRTAP2-4

LOC728683///LOC442421

DEFA1B///DEFA3///DEFA1

LOC100128414///RAD54B

ANKHD1-EIF4EBP3///ANKHD1///EIF4EBP3

LOC728636///LOC643696///GOLGA6L9///GOLGA6L5

PLA2G4B///JMJD7///JMJD7-PLA2G4B

GABARAPL3///GABARAPL1

PPIAL4C///PPIAL4B///PPIAL4G///PPIAL4A

RBMY1J///RBMY1E///RBMY1D///RBMY1B///RBMY1F///RBMY3AP///RBMY1A1

LOC729234///FAHD2B///FAHD2A

SLC2A4

TRBC1///TRBC2///TRBV7-4///TRBV7-6///TRBV7-7///TRBV7-8

LOC100126583///IGHV4-31///IGHV@///IGHM///IGHG3///IGHG2///IGHG1///IGHD///IGHA2///IGHA1///IGH@

LOC100130100///LOC652694///LOC652493///LOC650405///IGKV1-5///IGKC

C6orf15

LOC729162///LOC441528///LOC389906///LOC286434

LOC729863///LOC729501///ZNF834

LOC100132540///LOC339047///NPIP

VDAC1P8///LOC100288558///ADAT2///PEX3///FUCA2

LOC100134331///LOC100126583///LOC652128///VSIG6///IGHM///IGHG1///IGHA2///IGHA1///IGH@

HIST2H2AA4///HIST2H2AA3

RPL10P15///RPL10P8///RPL10P6///RPL10P16///RPL10

RPL37P21///LOC100131269

LOC100128334///AZGP1P1///ZKSCAN1///AZGP1

HIST2H3PS2///HIST1H2BN///HIST1H2BL

LOC440871///IGK@///IGKV3-20///IGKV3D-11///IGKV3D-15///IGKC

LOC652494///IGHM///IGHG3///IGHG1///IGHA1

FCHO2///GH1///CSH2///CSH1

UGT1A1///UGT1A4///UGT1A9///UGT1A6///UGT1A8///UGT1A10

ZFP91-CNTF///ZFP91///CNTF

IGHV4-31///IGHV@///IGHM///IGHG1///IGHA1

CBWD7///CBWD6///CBWD3///CBWD5///CBWD2///CBWD1

LOC653166///OR1D5///OR1D4

NACA2///NACAP1///NACA

OR1G1///OR1E3///OR1D2

LOC100130233///LOC399804

OR7E35P///OR7E18P///OR7E37P///OR7E47P

LOC100289523///LOC392555

CDY1B///CDY2B///CDY2A///CDY1

RRP7B///POLDIP3///RRP7A

RPL7P12///RPL7P24///RPL7P20///RPL7P26///RPL7P23///RPL7P8///RPL7P48///RPL7

LOC652493///LOC650405///IGK@///IGKC

CGB8///CGB7///CGB5///CGB

CLDN14

TBX6

OR2A9P///OR2A20P///OR2A5

GPR89C///GPR89A///GPR89B

IGLV2-11///IGLV2-18///IGLV2-23

LOC100126583///LOC652494///IGHV4-31///IGHM///IGHG3///IGHG2///IGHG1///IGHA2///IGHA1///IGH@

LOC653562///SLC6A10P///SLC6A8

NOMO3///NOMO2///NOMO1

RPL21P80///RPL21P87///RPL21P37///RPL21P18///RPL21P16///RPL21P14///RPL21P134///RPL21P45///RPL21P119///RPL21P93///RPL21P98///RPL21P82///RPL21P46///RPL21P61///RPL21P69///RPL21P19///RPL21P62///RPL21P29///RPL21P44///RPL21P39///RPL21P97///RPL21

LOC100288217///RPL18AP10///HECW1

SSX10///SSX2B///SSX9///SSX7///SSX3///SSX5///SSX2///SSX1

LOC652694///IGKV1-5///IGKC

LOC646756///FOXRED2///TXN2///CACNG2///EIF3D

IGHV4-31///IGHV@///IGHM///IGHG3///IGHG1///IGHA1

KRT8P9///LOC149501///KRT8

POLR2J3///POLR2J2///POLR2J4///POLR2J

LOC100134331///LOC100126583///LOC652128///IGHG1///IGHD///IGH@

LOC100132863///HMGB1L10///CTCFL///HMGB1L1///HMGB1

H2AFB1///H2AFB2///H2AFB3

SEPT8

GAK

C11orf61

TCNG The Cancer Network Galaxy 0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE29598_top8000

Network Nodes in the Gene Set

TCNG The Cancer Network Galaxy0.14

Database of Cancer Gene Networks from Public Gene Expression Data

Gene Set

GSE29598_top8000

Network Nodes in the Gene Set

TCNG The Cancer Network Galaxy 0.14